Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Oat
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ornithine aminotransferase
Also known as rOAT
Coordinate chr1:204562289-204582070
Strand -
Gene summary Predicted to enable identical protein binding activity; pyridoxal phosphate binding activity; and transaminase activity. Predicted to be involved in arginine catabolic process to glutamate and arginine catabolic process to proline via ornithine. Located in mitochondrion. Human ortholog(s) of this gene implicated in gyrate atrophy. Orthologous to human OAT (ornithine aminotransferase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Oat

Retroname Coord Strand Genomic Region ENSG
OatP1 chr2:233203889-233204892 + Intergenic
 N/A UCSC
OatP2 chr7:1328584-1330222 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_022521.3
GACGCGCCGGGCTGCCACATCGGGCTTCGTGGCTGAAATACAGTCAGTGTCGCTTAGCGGACGCTGTCAGGTCTCTCTGCACTTCCATTCCTGAAGGACCCACACAATGCTTTCCAAACTAGCAAGTCTGCAGACTGTTGCCGCTCTGCGTCGAGGACTCCGCACCTCAGTCGCCTCTGCCACATCTGTTGCAACGAAGAAGACAGAGCAAGGCCCACCATCCTCTGAGTACATTTTTGAACGGGAATCTAAATATGGTGCACACAATTACCATCCTTTACCTGTAGCCCTGGAGAGAGGAAAAGGCATTTATATGTGGGATGTGGAAGGCAGGCAGTACTTCGACTTCCTGAGTGCTTATGGTGCTGTCAGCCAAGGACACTGCCACCCAAAGATCATAGAAGCCATGAAGAGTCAGGTGGACAAGCTGACATTAACATCTCGGGCTTTCTATAACAATGTCCTTGGTGAATATGAGGAGTACATCACCAAGCTTTTCAACTACAACAAAGTTCTTCCTATGAATACAGGAGTGGAGGCCGGAGAGACTGCGTGTAAGCTTGCTCGCCGTTGGGGCTACACCGTGAAAGGCATCCAGAAATACAAAGCAAAGATCGTTTTTGCTGTTGGAAACTTTTGGGGTCGGACGCTGTCTGCAGTCTCCAGTTCCACAGATCCGACCAGTTATGATGGCTTTGGACCCTTCATGCCAGGCTTTGAAACCATCCCATATAACGATCTGCCTGCGCTAGAGCGTGCTCTTCAGGATCCCAATGTTGCTGCTTTCATGGTGGAGCCCATCCAGGGTGAAGCGGGTGTTATCGTTCCAGATCCAGGATACCTGACGGGAGTTCGAGAACTTTGCACCCGGCACCAGGTCCTGTTTATTGCTGATGAAATACAGACAGGATTGGCTAGAACTGGTCGATGGCTAGCTGTGGATCATGAGAATGTCAGACCTGACATAGTTCTTCTTGGGAAGGCCCTTTCTGGTGGCTTATATCCCGTGTCTGCAGTGCTGTGTGATGATGACATAATGCTGACCATTAAACCAGGCGAGCACGGCTCCACGTATGGCGGCAACCCACTAGGCTGCCGAATTGCTATTGCGGCTCTTGAGGTTTTAGAAGAAGAGCATCTTGCTGAAAACGCAGACAAGATGGGTGCCATCTTGAGAAAGGAGCTCATGAAGCTGCCATCTGATGTTGTGACTGCTGTGAGAGGGAAAGGGTTGCTAAATGCCATCGTCATCCGAGAAACCAAAGATTGTGACGCTTGGAAGGTGTGCCTGCGACTCCGAGATAATGGGCTTCTGGCCAAGCCAACCCATGGTGATATCATCCGGCTTGCCCCTCCACTTGTGATCAAAGAGGATGAGATCCGGGAGTCAGTGGAGATCATCAACAAGACCATCTTGTCCTTCTGAGAGTAGGAACTCTGGGGAGCCATCTTCAGATGGGGCTCTTGTGAAACTCTGCTTGGGATGGGCAGATTCGGCTTGTCTGTCTCCTAAAAGACAATTTTTTGAATATGTATTATATATTTCAGTTGATGCATAGTGGAGTGACACCTAGGAACCTGCAGGTGGCTGCGTGACACAAGAGTGAGAGCGAGAGGCATCTCTTTGTTAAAGTTTGACTGTGTGGGAGCTTTCTAAGGAGAAACAGATCTATCTGCATACAGCCTGCAGAGTCCTGCCGTAATTTACATGTGTCTTTACATCTTCCTTGCTGGCATGAATGTTTTGTATTTGGAAGTTTTTTTCTGAGATACTACATAAGAAACTGTTGAATCATTATAATCAATGAATGGTAAGATGATTGAGGGTTGAGCATATGTAAAATACTAGTTTAAAGTACACTTTGCATTGGCCAACAGCAGAATGTATTATATAGTTTCTGAGAATTCATTACCAAATTATACTTTAAGTGCTTGATTGCAATTTGTAAAACATTTATTTTCAGTATTTCTTTGAATAAAGCTTCATTTTTCTTTATACCCCAAAAGAGTATTTTGTATTTATCTTTTGGTAATAATCAGTGTATTATTTCACCCCTATGACTGGCATTTCATCCCCTATTGAGATCACTGGGTGTGTTTCAGGCTTTTTATTCTAAATAAAGCTATGACCAGTTCATATCTGTACAG