Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPS25
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein S25
Also known as COXPD50|MRP-S25|RPMS25
Coordinate chr3:15048512-15065315
Strand -
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein. A pseudogene corresponding to this gene is found on chromosome 4. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016]

Retrocopy(s) from MRPS25

Retroname Coord Strand Genomic Region ENSG
MRPS25P2 chr12:64442638-64442843 - Intragenic
ENSG00000255566 UCSC
MRPS25P1 chr4:80321532-80322267 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_022497.5
GCGGGAAGTGGAACCTGGCTCTGGGGAGAAGCCGCGTGAGATCCGCGCGGGTGCTAGCTAGTCCTTTCTCGTCGCTGCTCGGCTCGCGGCCCGTGGGGTCGGCCCCGCCACCGTTGCCGCCATGCCCATGAAGGGCCGCTTCCCCATCCGCCGCACCCTGCAATATCTGAGCCAGGGGAACGTGGTGTTCAAGGACTCCGTGAAGGTCATGACAGTGAATTACAACACGCATGGGGAGCTGGGCGAGGGCGCCAGGAAGTTTGTGTTTTTCAACATACCTCAGATTCAATACAAAAACCCTTGGGTGCAGATCATGATGTTTAAGAACATGACGCCGTCACCCTTCCTGCGATTCTACTTAGATTCTGGGGAGCAGGTCCTGGTGGATGTGGAGACCAAGAGCAATAAGGAGATCATGGAGCACATCAGAAAAATCTTGGGGAAGAATGAGGAAACCCTCAGGGAAGAGGAGGAGGAGAAAAAGCAGCTTTCTCACCCAGCCAACTTCGGCCCTCGAAAGTACTGCCTGCGGGAGTGCATCTGTGAAGTGGAAGGGCAGGTGCCCTGCCCCAGCCTGGTGCCATTACCCAAGGAGATGAGGGGGAAGTACAAAGCCGCTCTGAAAGCCGATGCCCAGGACTAAGGCCCACGGTCACTGTGGGCTGGGGTGATGGTGTCTGACCAGTGGGGAGATTGGAATGGGATTACTTTGGCCCAGGGAAGCCCCTGGTTCTGTCCCTGGAGACTCTGGAAATCCTTTTGCATTAAAAGGACTTTACACACCTGTGTAAAAGGATGTGGGAGAGGAGGGTCTGAAGCTGAGCTGCTAAATGAATATCCCTGCTCTGCTGGTCAATAAAACGCTTCCTAATAGCAGCTTGGCGTGTATCTGGTCCTAGTGAAGAGGAAGGCCTGTGTAGCAGAAAGGCTTTGGGCCTGAGAGGTTAAGGCCACAGCCTGTTGACACCTGTTTTGGTCCTGCGACCCTTTACTGGTCTCCGCTGGCTTTGAATCTTCCTCTGGGCTCTACTCTGGAGAACATAAGGGCTGCTGTGGTTGAGTCTGGCTAGCACTGTCTGTGGTTGGCAGTGTGTACACCCCTCCGTTCAGTTCCTTGGGGGTATTTTTCAGAAATCCAAAGGCAACCCTTCGTGCAGTGCTCACTTTTTTAAGTACAGTTGATTACCCTTGCCTGCTGGGGGGCCTAGCCATGGGCCAGAGATGGAGGAGCCCCAGTGGCTGACAGGCCAGCCTCACTCAGGCACGTACCTGCTGACCAGTCAGCCACTGCCAACCCATGGCCCAGCCACTGTGTGCATTAGCAGGGAGGTTTGTAGGCCATGGAGGAAATGAGGAGACACCACCTAGTGGAGACATTGGGGCCCTGCTGGGGGGATGGTGTCTATAGCTGGCTCTGCTGGCTCCCTCAGGCCCTGCTTACCAAGCTCTGGAGGAGGGAGTGCTGCATTACTGAGCACCTTCCTTGTTCTTTCCTCATAGGACACTGATGTTACTGTCACTTTAGTTATGCTAAAGTGGAGGTTTCAGCCTCCAGAAGACAGCAGAGCCTTCTAGGGTCACCTTAAGAATAGGTTTAGCTAggctgggtgtggtggctcatgcctgtaatcccagcactttgggaggctgatgtgggcggatagttgagcccaggagttcgagaccagcctgggcaacatggcaagaccttgtctctacaaaaagtacaaaaattagatgggtgtggtgtttcgcgtctgtagtcccagctatttgggaagctgaggtgggaggatctcgagcctgcgagatcaaggctgcagtgaatcatgatcgtgcgctactgcactccagcctgggccacagagcaagactgtctcaagaaaaaaaaTTTTTTAAATAAGTTTAATTATAAAGTGAAGGACCAGTTGGACCACGGACCCCTAGAAACTCAGCCAAGGAGACCTGACTTTATCTGAGACAGGAAGGCAGTGGTTAAAAGAATTAAAAAAGGACAGTGGTGCTTGACAGAGCAGGACTGAAGTTTTCATTCCTctacctgctggggccttggtcaagtcctaaaagctttccaggtctgtaactggttttgtctgtaaaatggggaaaaggttaccttttctgccACATGAAGTAGCTGGCTGGTGAAATGATGTCATACTACGATGTGTTTCATTAACTGTTGGAGATTATCACATTAAATTGAGCAGATTTGGATCTTTTACATTTGATGCTCAAGTTTGATTCTGTACCAGATCTGGGTTTGGGGTGATGGCTTGTCGGGGGTGGGAGGGGAAGGTGGGCAGAGACTGATGTATAATGGACAGGTGTTCCTTGAGTGACAGACTTACAAAGGGAGTGTTTAATTGAAATCTAGCATCTTGTCTCTCTGCTATCAGCATTTTGGCTGGGTGGAAAAAGCTCTCCTCCACAGAGAGCCCTCCCATGTCTGCTGGTTTCAGTTCCCCACCCAACTGACTGAAGTCTTGACCTTGATACCACCTGCCTGGGCGTTCTACTTGGCTGCAAGGGCTCTTCAGAAAGCACCTAGTTCCTTTTGGCTTTCATCTGCAGTGTAGGTCTCCATAGCTAGTGACACACAAAGCCTTATGAGAGTATTCCTTCCCTCTAGGGCCCAAAGAGGCTGCTAACCAGCAGGAATGTCCTGAACCAAAAGGAGTGGTGACCATTCTCTAGACAGAATAAATGTCTGGTCCCTAATGGGACAGATAACTAGGGTTTGAGTTCAGGCTTGACACAGGAGCAATGGGCAGTGAGGTGGACAGCCCAGACCCTGAAAGGACGTGTGGAGACAGCAGCAGTCCTGTGGTGCAGTTACTGCCTGTGTGGCCAGCTTCACAGGCAGCAGATAATTTGTGGAAATAAACATTATTTTCTTTTTTTGTTCCCTGTAGGCTACTTGATCCTGGATAGTTTCTCTTTAAACCTTTGTCTTTCCCTATTTTGTTTAGTAGTGATGAAAGATGGGTTTAAAATATACAGAAATGGGAGAAAATTAATTAGAGAAAATGTGAGGATTTTATAATTGATAACATGTTCTTAATTTTACTTGCACAAGCAGTGTTCACAGCCTTATTCTGAAGTGACCACTTTTCTTCTCTTTGAGGCACTACCTGGCAGCACCATCTAAACCTGTATCATCTGctgtggtcccagttactcaggaggctgaggcaggaggatcacttgagcccaggaggttgaggctggagtgagccatgactgtaccactgcattccagcctgggtgacggagtgaggccctatctGCCTGCCAGTGAGTTCTGTCATGCATCAGACTTTGGACCTCAGAATTTTCACCTGGAACATGAGAGGTCAGATGACATAATGAATATGTTCTAACTTCTGAAACTTTTGGAGCTTGTTTTTGCCCTTGATAGCACGTATCCTTAGAGAATAAGCTTGCCAATTTAAGGCCTGTCTGTAATGGCATCTGAATGTTCCAGCAGCCTAACTGTGCTCTGCTCCAGAAACATGTGTGTGGCTTCCCTACCTCCACACCAAGGAGCTGCCTTGCTGGGTGGATGTAAAGACTGTCCTGCCAGGGTTTCCCACTAAAGGTATTAATAAGTCCAGTGGACCACAGAGGGCCCAATCCCTCTTGGCCGCTAAGGCTAAGGTAGGAGCCAGAGAGCTGTAGAGACAGGACCACCAGGATGCTTCATGTCCATAACACAAGAGAGCGCTGCATTGTTTGGGGGCCAGGCATTACTACTATCATGAAGAAAAATGAAGAGCAGGATGCATGTTAGTCTTTAATTCACTTTTAATAGTATAAACCTCATTTAGGTAGTAGTATTAAGCCACAACAATAATGCCACATTGAAACAGCATTTAATAAAATGCATAAAGCTAATTCATGCACTGCAATACTCTATATACAAACACAACAATGCAAATTCTTCTTCAAGACTGAAGACATTGATTAGATATAAAATTCAGTTTAAAAAGAACATGCTATTTTTTAAATGCCATCACATAAACAAAGTGATTTCACAGGGAGAAGAAAGCTGTATAAAGCTGCAGCTTTCAACAGGTTTTAAACCTGGCATTAAAATGTAATGGCAAAACCAATATTTTCTATATTGTGAAGGGCAAAGGTTACAGAAACGGTCCCAAGAAAATCTAACACCCAAATTTTCCTTTGATAGATAGATGCCTTTAAAAGGGCTGGTAATGCAGTTACATTCTAACAGAGAAGTCCAAACTACAGGTAAAAACTACGGCTTGTACTGTGAAAAATGTGCAGCTTTTCAGTTATAAAACTAGTTGAACACTGGTTTACAAGATAATCCGTAGAACAGAGAGACTGTAGAAAAATATTCCAGCACTTGAGTTGTGTGTGGCAGCAGCATTTGAGTCCATGAATGCTATGGTCATTAAAATAATTGATTATACTTTCCTAAAGAAAAGCCATTTTTTAATGCAAAGTCTACTACTTCCAAATGTTATTCCAAACATTAAATTTTAACAGTCTATCAATCAATAAATGTTGAACATTTTTTTTCTA