Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name ITSN1
Plot displaying the genomic locations of a parental gene (in chr21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name intersectin 1
Also known as ITSN|SH3D1A|SH3P17
Coordinate chr21:33642452-33899861
Strand +
Gene summary The protein encoded by this gene is a cytoplasmic membrane-associated protein that indirectly coordinates endocytic membrane traffic with the actin assembly machinery. In addition, the encoded protein may regulate the formation of clathrin-coated vesicles and could be involved in synaptic vesicle recycling. This protein has been shown to interact with dynamin, CDC42, SNAP23, SNAP25, SPIN90, EPS15, EPN1, EPN2, and STN2. Multiple transcript variants encoding different isoforms have been found for this gene, but the full-length nature of only two of them have been characterized so far. [provided by RefSeq, Jul 2008]

Retrocopy(s) from ITSN1

Retroname Coord Strand Genomic Region ENSG
ITSN1P1 chr5:10664107-10665156 - Intergenic
ENSG00000251548 UCSC

Expression

Transcript Sequences

>NM_001001132.2
gtagagaagagtggaggcgccaggggagggagCGTAGCTTGGTTGCTCCGTAGTACGGCGGCTCGCGAGGAAGAATCCCGAGCGGGCTCCGGGACGGACAGAGAGGCGGGCGGGGATGGTGTGCGGGGCTGCGGCTCCTGCGTCCCTCCCAGCGGCGCGTGAGCGGCACTGATTTGTCCCTGGGGCGGCAGCGCGGACCCGCCCGGAGATGAGGCGTCGATTAGCAAGGTAAAAGTAACAGAACCATGGCTCAGTTTCCAACACCTTTTGGTGGCAGCCTGGATATCTGGGCCATAACTGTAGAGGAAAGAGCGAAGCATGATCAGCAGTTCCATAGTTTAAAGCCAATATCTGGATTCATTACTGGTGATCAAGCTAGAAACTTTTTTTTTCAATCTGGGTTACCTCAACCTGTTTTAGCACAGATATGGGCACTAGCTGACATGAATAATGATGGAAGAATGGATCAAGTGGAGTTTTCCATAGCTATGAAACTTATCAAACTGAAGCTACAAGGATATCAGCTACCCTCTGCACTTCCCCCTGTCATGAAACAGCAACCAGTTGCTATTTCTAGCGCACCAGCATTTGGTATGGGAGGTATCGCCAGCATGCCACCGCTTACAGCTGTTGCTCCAGTGCCAATGGGATCCATTCCAGTTGTTGGAATGTCTCCAACCCTAGTATCTTCTGTTCCCACAGCAGCTGTGCCCCCCCTGGCTAACGGGGCTCCCCCTGTTATACAACCTCTGCCTGCATTTGCTCATCCTGCAGCCACATTGCCAAAGAGTTCTTCCTTTAGTAGATCTGGTCCAGGGTCACAACTAAACACTAAATTACAAAAGGCACAGTCATTTGATGTGGCCAGTGTCCCACCAGTGGCAGAGTGGGCTGTTCCTCAGTCATCAAGACTGAAATACAGGCAATTATTCAATAGTCATGACAAAACTATGAGTGGACACTTAACAGGTCCCCAAGCAAGAACTATTCTTATGCAGTCAAGTTTACCACAGGCTCAGCTGGCTTCAATATGGAATCTTTCTGACATTGATCAAGATGGAAAACTTACAGCAGAGGAATTTATCCTGGCAATGCACCTCATTGATGTAGCTATGTCTGGCCAACCACTGCCACCTGTCCTGCCTCCAGAATACATTCCACCTTCTTTTAGAAGAGTTCGATCTGGCAGTGGTATATCTGTCATAAGCTCAACATCTGTAGATCAGAGGCTACCAGAGGAACCAGTTTTAGAAGATGAACAACAACAATTAGAAAAGAAATTACCTGTAACGTTTGAAGATAAGAAGCGGGAGAACTTTGAACGTGGCAACCTGGAACTGGAGAAACGAAGGCAAGCTCTCCTGGAACAGCAGCGCAAGGAGCAGGAGCGCCTGGCCCAGCTGGAGCGGGCGGAGCAGGAGAGGAAGGAGCGTGAGCGCCAGGAGCAAGAGCGCAAAAGACAACTGGAACTGGAGAAGCAACTGGAAAAGCAGCGGGAGCTAGAACGGCAGAGAGAGGAGGAGAGGAGGAAAGAAATTGAGAGGCGAGAGGCTGCAAAACGGGAACTTGAAAGGCAACGACAACTTGAGTGGGAACGGAATCGAAGGCAAGAACTACTAAATCAAAGAAACAAAGAACAAGAGGACATAGTTGTACTGAAAGCAAAGAAAAAGACTTTGGAATTTGAATTAGAAGCTCTAAATGATAAAAAGCATCAACTAGAAGGGAAACTTCAAGATATCAGATGTCGATTGACCACCCAAAGGCAAGAAATTGAGAGCACAAACAAATCTAGAGAGTTGAGAATTGCCGAAATCACCCATCTACAGCAACAATTACAGGAATCTCAGCAAATGCTTGGAAGACTTATTCCAGAAAAACAGATACTCAATGACCAATTAAAACAAGTTCAGCAGAACAGTTTGCACAGAGATTCACTTGTTACACTTAAAAGAGCCTTAGAAGCAAAAGAACTAGCTCGGCAGCACCTACGAGACCAACTGGATGAAGTGGAGAAAGAAACTAGATCAAAACTACAGGAGATTGATATTTTCAATAATCAGCTGAAGGAACTAAGAGAAATACACAATAAGCAACAACTCCAGAAGCAAAAGTCCATGGAGGCTGAACGACTGAAACAGAaagaacaagaacgaaagatcatagaattagaaaaacaaaaagaagaagCCCAAAGACGAGCTCAGGAAAGGGACAAGCAGTGGCTGGAGCATGTGCAGCAGGAGGACGAGCATCAGAGACCAAGAAAACTCCACGAAGAGGAAAAACTGAAAAGGGAGGAGAGTGTCAAAAAGAAGGATGGCGAGGAAAAAGGCAAACAGGAAGCACAAGACAAGCTGGGTCGGCTTTTCCATCAACACCAAGAACCAGCTAAGCCAGCTGTCCAGGCACCCTGGTCCACTGCAGAAAAAGGTCCACTTACCATTTCTGCACAGGAAAATGTAAAAGTGGTGTATTACCGGGCACTGTACCCCTTTGAATCCAGAAGCCATGATGAAATCACTATCCAGCCAGGAGACATAGTCATGGTTAAAGGGGAATGGGTGGATGAAAGCCAAACTGGAGAACCCGGCTGGCTTGGAGGAGAATTAAAAGGAAAGACAGGGTGGTTCCCTGCAAACTATGCAGAGAAAATCCCAGAAAATGAGGTTCCCGCTCCAGTGAAACCAGTGACTGATTCAACATCTGCCCCTGCCCCCAAACTGGCCTTGCGTGAGACCCCCGCCCCTTTGGCAGTAACCTCTTCAGAGCCCTCCACGACCCCTAATAACTGGGCCGACTTCAGCTCCACGTGGCCCACCAGCACGAATGAGAAACCAGAAACGGATAACTGGGATGCATGGGCAGCCCAGCCCTCTCTCACCGTTCCAAGTGCCGGCCAGTTAAGGCAGAGGTCCGCCTTTACTCCAGCCACGGCCACTGGCTCCTCCCCGTCTCCTGTGCTAGGCCAGGGTGAAAAGGTGGAGGGGCTACAAGCTCAAGCCCTATATCCTTGGAGAGCCAAAAAAGACAACCACTTAAATTTTAACAAAAATGATGTCATCACCGTCCTGGAACAGCAAGACATGTGGTGGTTTGGAGAAGTTCAAGGTCAGAAGGGTTGGTTCCCCAAGTCTTACGTGAAACTCATTTCAGGGCCCATAAGGAAGTCTACAAGCATGGATTCTGGTTCTTCAGAGAGTCCTGCTAGTCTAAAGCGAGTAGCCTCTCCAGCAGCCAAGCCGGTCGTTTCGGGAGAAGAATTTATTGCCATGTACACTTACGAGAGTTCTGAGCAAGGAGATTTAACCTTTCAGCAAGGGGATGTGATTTTGGTTACCAAGAAAGATGGTGACTGGTGGACAGGAACAGTGGGCGACAAGGCCGGAGTCTTCCCTTCTAACTATGTGAGGCTTAAAGATTCAGAGGGCTCTGGAACTGCTGGGAAAACAGGGAGTTTAGGAAAAAAACCTGAAATTGCCCAGGTTATTGCCTCATACACCGCCACCGGCCCCGAGCAGCTCACTCTCGCCCCTGGTCAGCTGATTTTGATCCGAAAAAAGAACCCAGGTGGATGGTGGGAAGGAGAGCTGCAAGCACGTGGGAAAAAGCGCCAGATAGGCTGGTTCCCAGCTAATTATGTAAAGCTTCTAAGCCCTGGGACGAGCAAAATCACTCCAACAGAGCCACCTAAGTCAACAGCATTAGCGGCAGTGTGCCAGGTGATTGGGATGTACGACTACACCGCGCAGAATGACGATGAGCTGGCCTTCAACAAGGGCCAGATCATCAACGTCCTCAACAAGGAGGACCCTGACTGGTGGAAAGGAGAAGTCAATGGACAAGTGGGGCTCTTCCCATCCAATTATGTGAAGCTGACCACAGACATGGACCCAAGCCAGCAATGAATCATATGTTGTCCATCCCCCCCTCAGGCTTGAAAGTCCTCAAAGAGACCCACTATCCCATATCACTGCCCAGAGGGATGATGGGAGATGCAGCCTTGATCATGTGACTTCCAGCATGATCACCTACTGCCTTCTGAGTAGAAGAACTCACTGCAGAGCAGTTTACCTCATTTTACCTTAGTTGCATGTGATCGCAATGTTTGAGTTATTACTTGCAGAGATAGGAGCAAAAATTACAAAAACACACAGGGTAGTGGGTCCTTTTGTGGCTTTCCTAGTTACTCAAATTGACTTTCCCCCACCTTTGCACAGGTGCTTTCAATAGTTTTAAAATTATTTTTAAATATATATTTTAGCTTTTTAATAAACAAAATAAATAAATGACTTCTTTGCTATTTTGGTTTTGCAAAAAGACCCACTATCAAGGAATGCTGCATGTGCTATTAAAAATTGTTCCAAATGTCCATAAATCTGAGACTTGATGTATTTTTTCATTTTGTCCAGTGTTACCAACTAAATTGTGCAGTTTGGGGCTTTTCCCCCTTACCATAGAAGTGCAGAGGAGTTCAGTATCTCTGTTTTAAAGACGTATAGAATGAGCCCAATTAAAGCGAAGGTGTTTGTGCTTGTTTGTGTGTATCAGCTGTACCTTGTTGAGCATGTAATACATCCTGTACATAAGAAATTAGTTCTTTCCATGGCAAAGCTATTACCTTGTACGATGCTCTAATCATATTGCATTTAATTTTATTTTGCACAGTGACCTTGTAGCCACATGAGAAAGCACTCTGTGTTTTTGTTCGGTCTCAGATTTATCTGGTTGAGTTGGTGTTTTGTTTGGGGTTTTTAATTTTGCGTGTTTGCATAGCATAAAATCAGTAGACAACACCACTGAGGTCGTTACGATCAACGATATCCACAGTCTCTTTTTAGTCTCTGTTACATGAAGTTTTATTCCAGTTACTTTTCATGGAATGACCTATTTTGAACAAGTAATTTTCTTGACAAGAAAGAATGTATAGAAGTCTCCCTGCAATTAATTTCCAATGTTTACATTTTTTAACTAGACTGTGGAATTTCTACAGATTAATATGAAATGGAGCTCATGGTCCGTTTGTGTGTTAGATATGCTGTAGCTGAAGCCCTGTTTGTCTTTTAAACACTAGTTGGAAGCTCTCAATAAAAATGCCTGCTGCTCACAGCACAGAAAATGGGGCAGGGGGAGCCTCAAGCACAATCTAGCTGTCCTCCTAAAGACTCTGTAATGCTCACTCCCCTCGCGTTCTCCCGGCGCTGTCGGGAGGCTGTGCTGGTGGTCGTGTAGAGGTCCTTCTCCTTTCACATGGTGCAGAGAGCGAGGACCTCTCCTCCTCGTTCAGTTGCACTTCAGTATTTTCACGGATATGAATGTAAAATATATAAATATATAAACCTGCGGCTTTAACAACTGTAATACAACCTTTTGAATTAGTTCCGTGTATAGATAATTAAATTCTTCATACAAAAGTTA