Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl30
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name ribosomal protein L30
Also known as -
Coordinate chr7:73213538-73216431
Strand -
Gene summary Enables selenocysteine insertion sequence binding activity. Involved in liver regeneration and positive regulation of selenocysteine incorporation. Located in ribosome. Part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in herpes simplex. Orthologous to human RPL30 (ribosomal protein L30). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl30

Retroname Coord Strand Genomic Region ENSG
Rpl30P1 chr1:229219692-229220149 + Intergenic
N/A UCSC
Rpl30P2 chr1:42741169-42741594 - Intergenic
N/A UCSC
Rpl30P3 chr2:102919198-102919640 - Intergenic
N/A UCSC
Rpl30P4 chr2:24411690-24411859 + Intergenic
N/A UCSC
Rpl30P5 chr3:104091088-104091529 + Intragenic
N/A UCSC
Rpl30P6 chr3:133151984-133152335 + Intergenic
N/A UCSC
Rpl30P7 chr3:24513800-24514224 - Intergenic
N/A UCSC
Rpl30P8 chr3:72674133-72674550 - Intergenic
N/A UCSC
Rpl30P9 chr4:167174104-167174332 + Intergenic
N/A UCSC
Rpl30P10 chr4:35170710-35170913 + Intragenic
N/A UCSC
Rpl30P11 chr4:6316190-6316646 + Intragenic
N/A UCSC
Rpl30P12 chr4:69766258-69766705 + Intergenic
N/A UCSC
Rpl30P13 chr5:35976912-35977365 - Intragenic
N/A UCSC
Rpl30P14 chr5:8113722-8114182 - Intergenic
N/A UCSC
Rpl30P15 chr6:111399002-111399317 + Intragenic
N/A UCSC
Rpl30P16 chr7:134531069-134531263 - Intragenic
N/A UCSC
Rpl30P17 chr8:122635971-122636345 + Intragenic
N/A UCSC
Rpl30P18 chr8:31492332-31492776 + Intergenic
N/A UCSC
Rpl30P19 chr9:23280443-23280588 + Intergenic
N/A UCSC
Rpl30P20 chr9:64704212-64704664 - Intergenic
N/A UCSC
Rpl30P21 chr9:88748479-88748933 - Intergenic
N/A UCSC
Rpl30P22 chr10:34110511-34110911 - Intergenic
N/A UCSC
Rpl30P23 chr10:38024476-38024937 - Intergenic
N/A UCSC
Rpl30P24 chr10:55303313-55303753 - Intragenic
N/A UCSC
Rpl30P25 chr10:70794856-70795292 - Intergenic
N/A UCSC
Rpl30P26 chr12:47101419-47101710 + Intergenic
N/A UCSC
Rpl30P27 chr13:95416171-95416632 + Intergenic
N/A UCSC
Rpl30P28 chr14:22031581-22032038 - Intergenic
N/A UCSC
Rpl30P29 chr15:27932235-27932430 - Intragenic
N/A UCSC
Rpl30P30 chr17:2375501-2375825 + Intergenic
N/A UCSC
Rpl30P31 chrX:58579770-58580195 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022699.3
CTTCCTTTCTCGCTCCCCGGCCATCTTGGCGTCTGATCTTGGTTGGGGCTTGTCCCGCACCTAAGGCAAGAGGATGGTGGCTGCAAAGAAGACGAAAAAGTCTCTGGAGTCAATCAACTCTCGGCTCCAACTTGTTATGAAAAGTGGAAAGTACGTGCTGGGGTACAAACAGACTCTGAAGATGATCAGACAAGGCAAAGCGAAATTGGTTATCCTCGCCAACAACTGTCCAGCTTTGAGGAAATCTGAAATAGAATACTATGCCATGTTGGCTAAAACTGGTGTCCATCACTACAGTGGCAATAACATTGAATTGGGCACAGCGTGTGGAAAATACTACAGAGTATGCACACTGGCTATCATTGACCCAGGTGATTCCGATATTATTAGAAGCATGCCAGAACAGACTGGTGAGAAGTAAACAAGAAAGTTCTCCTTTAATAAAACTTTGCCAGAGCTCCTTT