Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Gabarapl2
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name GABA type A receptor associated protein like 2
Also known as Gef2
Coordinate chr19:44164935-44175771
Strand +
Gene summary Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in several processes, including autophagosome assembly; autophagy of mitochondrion; and negative regulation of proteasomal protein catabolic process. Predicted to be located in Golgi membrane. Predicted to be active in autophagosome membrane and cytosol. Orthologous to human GABARAPL2 (GABA type A receptor associated protein like 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gabarapl2

Retroname Coord Strand Genomic Region ENSG
Gabarapl2P1 chr2:122245164-122245881 + Intergenic
N/A UCSC
Gabarapl2P2 chr3:95105092-95105917 + Intergenic
N/A UCSC
Gabarapl2P3 chr5:71999747-72000291 - Intergenic
N/A UCSC
Gabarapl2P4 chr8:95943671-95944782 + Intergenic
N/A UCSC
Gabarapl2P5 chr11:26622094-26622561 - Intergenic
N/A UCSC
Gabarapl2P6 chr13:45919769-45920648 - Intergenic
N/A UCSC
Gabarapl2P7 chr15:57719384-57720307 + Intragenic
Intragenic
N/A UCSC
Gabarapl2P8 chr19:59990640-59991461 - Intergenic
N/A UCSC
Gabarapl2P9 chrX:33828502-33829232 + Intragenic
N/A UCSC
Gabarapl2P10 chrX:657627-657776 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022706.2
CGTTGTTGTTGTGGTCGCTTCGCCGAAGTCTGCGGCTCAAAGAGCCGGCTCCGTCGCTTCCCGCCGCCATGAAGTGGATGTTTAAGGAGGACCACTCGCTGGAACACAGATGCGTGGAATCCGCGAAGATCAGAGCGAAATACCCCGACCGGGTTCCGGTGATCGTTGAGAAAGTCTCTGGCTCTCAGATTGTTGACATTGACAAGAGGAAGTACTTGGTCCCATCTGACATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCTTCTGAGAAGGCCATCTTCTTGTTTGTGGACAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTGTATGTGGCCTACAGCGGAGAGAACACTTTTGGCTTCTGAGCCCTTGCTGGGCTAGGTGCACCCTTCCTGCTTGTGTATCCTGTAAATAACTGGCTGTTCTCAGTTACTCCGCCGGAGCCTCCACACAGACCTACTAGTGCATTTGTAACTGGATTTATTTCTTAATATATTGGAAGGTTTTGTTTTCCTTAGATTAGTAAATTATCATACAGAGTTTTATTTTCAGTTTTCTTTTGTGCACTGTCCTCATGGCTATATGCTCCAAGGAACCTGTCCTCCGGAATCACATTTAATGAAGATACTTCCGAAATGAAGGGCGGTAGGTGTGGTATTAAAGTGACAAGGAGGGATGACGCATTGTTCTGGATTATGTTCGGAGTGTTAGACGGCTAAGTATTAAAAGCCCCCAAATTAAATCCTTAGCAATCAGAACACTTGCTTCACTAGATTTTGCCAACTGCAAATCATGTTGGACTGAGCTAATCTGTTCTTTCTGAGACTATAAGGTAAATGATTAACAATAAAGCCTCCATGTAAAGGCATTACAGTGTGACCATGGTCCTCATTCACCTTCACGAGTCAGAAATGGCTCCTGCAACAGCTTAGCCTAGGATGGGAAGTTGTGGCTGGTATCATAAAAAGGGTTGGTTTTTTTCAGTGGTTAATGTAGTCATAGGTTCAGATTTGGGACTGTATCAAAAGGTTTATACTGCAAAGTCTCGCTTCTACCACTTTTTCTGATCTCTGCTGCTTATGGGAAATTGTATGGGCTTATTTTCAGTATTTTAGTAGCAAAAGTTTAAGTACGAATATATATATATTTTAGAAGTTATTTTGCCTGCATGTGTGTCTGTGGGCGTGACTGATCTGCATttgtgagctgccgtgtgggtactgggaattgaacccaggtcccctggaaaagcagccagtgctcttacatgcagaactctctctctagcaccATATATGCATATTTGTTTACATATGTAAATAAAATGTGTATATGTTATTAAAACATATAGAgggctgaagagatggctcagcagctaagggcaatgaggtcctgggtttaattcccagcagccacatggtggctcttcatgatgtcatctgatgcccttacctgcctgcaggtctatttgcagatagagcactcatatacataaatctttctttaaaaaaaTAAAACGTATGTTTATACACTGGA