Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name STMP1
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name short transmembrane mitochondrial protein 1
Also known as C7orf73|Mm47|PL-5283
Coordinate chr7:135662514-135676416
Strand +
Gene summary Predicted to be involved in positive regulation of NLRP3 inflammasome complex assembly and positive regulation of interleukin-1 beta production. Predicted to be located in mitochondrial intermembrane space and mitochondrial outer membrane. Predicted to be active in mitochondrial respirasome. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from STMP1

Retroname Coord Strand Genomic Region ENSG
STMP1P5 chr16:21713243-21713439 - Intragenic
 N/A UCSC
STMP1P1 chr2:202239502-202239989 + Intergenic
 N/A UCSC
STMP1P2 chr5:132287850-132288122 - Intergenic
 N/A UCSC
STMP1P3 chr6:56922282-56922921 + Intragenic
 N/A UCSC
STMP1P4 chr7:56603343-56604025 + Intergenic
 ENSG00000271047 UCSC
STMP1P6 chrX:46893791-46894069 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001130929.2
AGGCTCGGACCGGCCCGCGGAGCTGCTGCAGTCCTTCGCGCCCTCCTCGCCCTCCCCACCGACATCATGCTCCAGTTCCTGCTTGGATTTACACTGGGCAACGTGGTTGGAATGTATCTGGCTCAGAACTATGATATACCAAACCTGGCTAAAAAACTTGAAGAAATTAAAAAGGACTTGGATGCCAAGAAGAAACCCCCTAGTGCATGAGACTGCCTCCAGCACTGCCTTCAGGATATACTGATTCTACTGCTCTTGAGGGCCTCGTTTACTATCTGAACCAAAAGCTTTTGTTTTCGTCTCCAGCCTCAGCACTTCTCTTCTTTGCTAGACCCTGTGTTTTTTGCTTTAAAGCAAGCAAAATGGGGCCCCAATTTGAGAACTACCCGACATTTCCAACATACTCACCTCTTCCCATAATCCCTTTCCAACTGCATGGGAGGTTCTAAGACTGGAATTATGGTGCTAGATTAGTAAACATGACTTTTAATGAGTAGTGTCTTCTTTATCGTTTGCGATTTTTACTACCTTTTTTCAAAAGAAAAATTGATGAGTTTTGTATAGCTGGTCAGATACAAATAATAGTGACTTCACAGTTTAGTAATTATAATGGGTACTTGTTAAACATTTGGTACTAAATTATGTTGCTGCAAAGTAATTAAAATTAGTATCTAGAGCTAGTTTCTGGTGAATTATTCATTTATTTTGTACTGTTGTTAGGCAGCTCTGTAGTTGCTAATTTAACCAATAAGTCAATTTGCTATTCATGAAGAAACGATTCTGAGAATCCtgtcaggaattggggaatgaaaaaatacacaaaataatggtctttgtcccagtagagttcatagtctaTTTAGTGTGCATGTTTTTCCTTAATGATGTATTTGATCTGACTTTTTTCCTTCTCAAAAGAATCATACTTGGGATTACAGGTACATTTGATGTTATATGATGGATAAGTGAAAAGTTTTTAAAGGAGATTTTATACCTTTTCACATTAAAAAAGGTATTTATATTATTACTTTGTAGTGATTGTCTTAAGAAAAAATATAGCCCAAATGTATAGTAAAATCAGCAGCTCAAGAAGAATTTCTGCTTCTCTTTGTAGTTGATGCTTTGTTTTTTCCTGCAGTCAGAAATTCCTTGTATTTGTCAAATGTATAATCAGCTTGTATTGTTTTTAAATTAAAAAAAAATTTGAATAATTAACTTTTGCCATGGGACaagatacaaaagtaatttcatataaagggcctctcccacccctgttctctggctcctggctcctgtttgacaagttactgttaccacttcgccttatacttttgagaaagagtctgtgcctaaacaaacacgtgtaacacaaatagtaactatacatggaggtctagccctcgccttttttttttctttttttcttttttaatggagatcattctataccagcatgtaagtagcaaggaacctcattctttttttggctgcctaaaatttttttgaatagatataacataattgatttaatctgctactggtgaatgcttaggttgttcttttgctattacagtgataacttcaatcctaatgttattaagcatatcgattcagggtatagctataagatgaagtcctaaaagtataattTAGACTAAATACAAATACCCATTTCGCTAGCTGTTTTGTTTCAGAGGACTTGTTGAGCAGCTTCACTAATAATGCCATTTTTGAAGACATGGCAGGTTCAGAATCAATAAACTGGAAGAATTGTTCAGAGCATCTTTTTTCAGACAGTGATGACATTGATTCTGTATATGATAAAGTGATTCTGCTTCTCTTTGACAACTTGCATCTCTCCTACATGGAAGTAAGTTTTATTCCTGTCAATGTTGTCTTTGTGTGTgacagattaggattaaattatggtttgacttttcctagcagcgtgatcatgggcaagtGGCttttttttttttttttttttgagacagagtctcactctgctgcccaggctggagtgcagtggcacagtcttggctcactgcaactcctgcctcccggtccaagtgattctcgtgctgcagcttctcaagtagctggcatcaccaccacacctggctaatttttgtatttttagtaacgacgaggtttcaccatgttggcaaagctggtctcaaattcctggcctcaagtgatctgcccacttcagcctcccaaagtgttgggattacaggcgtgagccactgcgcccagcTTTTTTAAACTTTTAGATTCATTTAATAGGTAAATTGCATGTCACGGGTTTGTAGcttattctttcagaaactcttgcattatctgtagacgtggacgtaaatatccacctcatagggttttcataaaaaataattgagataatgtatgtaatgtttcacagtgctttgcagactatctaataaatagtagctattaGTACAAA