Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Map1lc3b
Plot displaying the genomic locations of a parental gene (in chr19) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name microtubule-associated protein 1 light chain 3 beta
Also known as LC3B|Map1lc3|Mpl3|zbs559
Coordinate chr19:53635449-53643970
Strand +
Gene summary Enables microtubule binding activity and protein domain specific binding activity. Involved in positive regulation of protein binding activity. Located in several cellular components, including autophagosome membrane; dendrite; and neuronal cell body. Part of microtubule associated complex. Orthologous to several human genes including MAP1LC3B (microtubule associated protein 1 light chain 3 beta). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Map1lc3b

Retroname Coord Strand Genomic Region ENSG
Map1lc3bP1 chr3:10845258-10846670 - Intergenic
 N/A UCSC
Map1lc3bP2 chr3:6885630-6888037 - Intergenic
 N/A UCSC
Map1lc3bP3 chr4:6175659-6176477 - Intragenic
 N/A UCSC
Map1lc3bP4 chr6:116220130-116220663 - Intragenic
 N/A UCSC
Map1lc3bP5 chr7:77295530-77296027 + Intergenic
 N/A UCSC
Map1lc3bP6 chr16:75864147-75864669 - Intergenic
 N/A UCSC
Map1lc3bP7 chr16:81650922-81651422 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_022867.2
CTGCGGGTTGAGGAGACACACAAGGGAAGTGATCGTCGCGGGAACCAGATCGTCTGACCCAGGACCCCCGCGCGCCATGCCGTCCGAGAAGACCTTCAAACAGCGCCGGAGCTTCGAACAAAGAGTGGAAGATGTCCGGCTCATCCGGGAGCAGCACCCCACCAAGATCCCAGTGATTATAGAGCGATACAAGGGTGAGAAGCAGCTGCCCGTCCTGGACAAGACCAAGTTCCTTGTACCTGATCACGTGAATATGAGCGAACTCATCAAGATAATTAGAAGGCGCCTGCAGCTCAATGCTAACCAAGCCTTCTTCCTCCTGGTGAATGGGCACAGCATGGTGAGTGTGTCCACACCCATCTCTGAAGTGTACGAGAGCGAGAGAGATGAAGACGGCTTCCTGTACATGGTCTATGCCTCCCAGGAGACGTTCGGGACAGCACTGGCTGTGTAAGACTAGAACAATACCTAATGTTTGTTAAGCCCCTACCAAGGCAAAAAGGGACGTTACCAGCGGAAGCTGGTCAGCTCACCACCCCACAGATCAGAACGTAGGCACCCACGTAGGGGATTAGAAACTATCTCAGCCAGAAACTGAGTGCCATGCAAGTGCATTTGGCTTGGAAACTCATCTAAACTAGACTATCCTGTGTTCAAACTTTAGTTTAAAAATAAAATACTTTGCATCCTAAGTTGCCAATAAAAAGACCAAGTTATTTTGACATTTTCTCCCTAGTAGGGACTTGAAATAGAAGAGCAGTGTCAGGGGCGGCCTCTTCCTGGGACCTGCTGCCTTCTCTAAAAGGGCTTCTACTCAGAGAAGTCCCTGGAAACAGTCCCTCGCCCAGGTTGCCTAGCAGAGGTCTCCAGAGGGCTCTGGCTTTGCCCGAAACAGGTCAGGTGTATAGGACATAGCTCTAAGGACCCACATGGGCCCTGGTCCTGAACCCCAGCCATTTCACCTCAGCAGTGTGGGACGCTCACCCGCTGCTGTGTAGACATTACCACATGCACCACTGCTCAGAGGCCAGTTCCAACCCTGTCCAGGGGTTGCTTGGTCCAGCTTCTTAAGAAACTGCAAGGTGTTTTTCTCCTGGTTTGGACTTCTCTGGTCCATGCCTGCTTCAGGTGTGCAATGCTGGCCTTCCCGTGCAGCTGTCCAGTGGAAGGCTGAAGTCCAAGTGCACTCGCCTTGTACGTGGTTCACACCTACTTGTCAGTGCACACCCACAGTCTTTGTAAGGGCGGTTCTGACAGCTGTTGGGGTTTCCCCATTTCATGCCAGTACATACATGTCAGCTCTGAAGGCAACAGCAACAGGAAGAGAGCCATGCTTGTGACAGACATACAGCCACTTCCAACTAAAGCAAGCCTCTGCTTCCTGCTACCTGCATGGAGCCCACTGTGACACTCAGACCATCCCCGGTCACTCACTCGTGTCTGAGAATCTCAGTGAGAGCTGCCTCTGTCACGGACGGAAGCCAACACAGCCACCTCTCGACCTGGCTCCCCACAGCACCCACCCTCCCTGCATGCAGCTGTCCCTGCTAACCCCCAATGTTATGTTACACTGTGTAAATCCCCACTGCTGCCGTGTGTGGGTTGTGTACGTCGTCATGTCCCTGGTTTATAACTATGGTGCGGTCGGGAAGGATTCCTGTAATGCTGCTCTAAGATGCTGCTCAGGCAGCCATTGTAGGACACCTGTACTCTGATGCACTAAGTCAATAAAGGCACAACTGGA