Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPS11
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein S11
Also known as HCC-2|MRP-S11|S11mt
Coordinate chr15:88467708-88480776
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that contains a high level of sequence similarity with ribosomal protein S11P family members. A pseudogene corresponding to this gene is found on chromosome 20. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2016]

Retrocopy(s) from MRPS11

Retroname Coord Strand Genomic Region ENSG
MRPS11P1 chr20:20853850-20854546 - Intergenic
ENSG00000225803 UCSC

Expression

Transcript Sequences

>NM_001321970.2
AATTCAAGTCATGCAGGCTGTGAGAAACGCGGGGTCGCGGTTCCTGCGGTCCTGGACTTGGCCCCAGACAGCCGGGGTCGTGGCCAGAACGCCGGCCGGGACCATCTGCACAGGCGCTCGACAGCTCCAAGACGCTGCGGCCAAGCAGAAAGTTGAACAGAACGCGGCTCCCAGCCACACCAAGTTCAGCATTTACCCTCCCATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAATTTGAGGAGATCCCAATTGCACACATTAAAGCATCCCACAACAACACACAGATCCAGGTAGTCTCTGCTAGTAATGAGCCCCTTGCCTTTGCTTCCTGTGGCACAGAGGGATTTCGGAATGCCAAGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCGCAGCGGCGAGAGCTAAACAAAAGGGCGTGATCCACATCCGAGTTGTGGTGAAAGGCCTGGGGCCAGGACGCTTGTCTGCCATGCACGGACTGATCATGGGCGGCCTGGAAGTGATCTCAATCACAGACAACACCCCAATCCCACACAACGGCTGCCGCCCCAGGAAGGCTCGGAAGCTGTGATGGGAAGGAGGCCTGCACTTGGACCTGACCTCAAGCCTCAGCTCCAGTGGGACCTTGTAAAATGCTCCCTGTCAGAGCTCTCCAGAATATGCTTGTTGGAGATCCTTCAGGCAGTAAGGGAGAGTTTTGCCTCCTTACACAGTGGCCTTTGCTTGCACCTCCAGCTGGAGATGGGTGTGCCCCAGAAGTAAGCTTTGCATCTCTTACAAGAGGGGAGCTACAGGGGCAGCCGTGGCCTAGGCCCAAACTCTGCTCTGAGAAAATAAATATCTGTACCACCTGTCATAATTTTGAGATTTTTTGCTTTCAGAGTTACGTAATTCCTAATTCCTCTTGAAAAAGAGAGTGTGAAATGAGGTGAGGCCTCAGATGAAAGTAAAATATAAATGTGAGTTGCTATTTACCAGACACTTCTGGTTTCAGATATTTCTTTTCTAGCCCCTTACCCAAGATTTCTAGAGCTAATCCTAGTAACTTTTCTTATTAATGACTTATAATTTGGCCCCAAATTGGAGCTTTTTGCCACCTACCTCTGGATTCTGATGGATTTCGCCATTATGGGCATGTTTAAAGTTAGCCCTAAACACAGGATTTTCTACAAGTGGACAGTCAAACTCCCCACACTAAAGTGGCAGTCATCGTTTACACTCCATGGGCTTCAGCAGTCCCAGCACTAACGAGAGAGTGCCCTAAAAGCGGGGAGGGTAGAGTTGTACAAAACATGATTCTTggccaggcacggtggctcacacctgtaaccctggcactttgggaggccaaggcgggtggatcacttgagtccagttagagaccagcctgggcaacatggtgaaaccccctctctactaaaaatacaaaaattaaccaggcatggtggtgtgcgcctgtaatcccagctactctggaggctgaggcatgaaaatcgcttgaacccaggaggtggaggctgcagtgagctgagatcatcctactgcactccagcccaggtgacagcgagactgtctcaaaaaaataaataaatataaataaaaaTTTAAAAAAATTAAAAAAAAAAACCTGATGATTCTCTAGAAAATAGGGTGGATGGCAGGATGGGCTTGAGTAGAGTCCAAATCTAGAAGTGCAGAAAGCAAGTTGATAAGGAACCTGGGTAGTGCTGGCAGTGGGGCACAACTCAGGACCCCCAGGCAGGACTGACTGCTCCTCTGTTGGGGCTCTAGGGTTCCTGGATACGGCACAGAGGCCAAAGGTGGGGGCTCTAGAGACACGACCAGAGAGTCCCCTCTTCCACAGGCAAAGACTAAGGGTGAGAGTATCACCAGAAGCTGAGAAGGAGTGGTCAAGTACACAAAAGCACTGTTCCTCCCAGATGAGTGCAGGAAGGGCTGCTGACCAGAAGGGGAAGGCACTGTGGAGTTTTACTTCTGTGTCCAGCCAGCTAAGTACTGTGATCTGCCTGAACTCAGTATAGGAAAAGACACAGATGCCCCCTTAAATAGGCAAGAGGCTGTGTTAGGACAAAGAAAGGAGGAAGATCACGAACCAAGACATGAATTTAGAGGAAAAATGCCTCCCTACTGCCTTCTCTTTAGTCCTTAGCAGGTCCTATGAAGGCCATCTTGTGACAGTGACCAAAGAAGCCCAACCGGAGGCTTCTTGGATCAAAGCCACTGTCGGAAGGAATTAGACTGTTTCACCGCAAAACTACATATAAACACAATGCATTAAAACATGGTGCACTTGAAAATTGCACTTCGCGATTTGATATGGTTTGGTGGACAGAGGGCCCGTAGCCATCAGACAGTtcaatcagggtctgagcaggaaacagctcacaaggtttaagagaaaagctcaatgaaagctctttgcagaggcatgggtaagattaaggaaataaagaaggtggactacaaagcagctgccaccctaggctagaagaggcagggaAGAACAGTTCCTAGAAcctggcaggagctgccacagcagcagagtgcacctctgccaaaaccatggcctgagggagagggaagaaatgcctggctgttcccggcctgtagtcccttgctggggtcccccttggctgatcccaaaaggaagcaaaaaggaagggaactcagtgttgtggtacttggaggctcagcctcccaggctgcagagtggatctggaggggcacgtagaggatagtaaacacaGGAGGCTTCTGTGGCTTCTGTAAGTCCTCCATACACCATAGGtttttattttggttttggtttttgagtctcgttgtcacccaggctggattgcagtggtacgaccatggttcactgcagcctcaaactcctgggctcaagtgatcctccagcttcagcctcctgtgagcatctgggactacaggcgcatgccaccacacatggataatttttgtattttttgtattgagaccaggtcttgaactcctggtctcaagcagtccccccacctcggcctcccaaagtgctgggataacaggcgtgagccactgcgcctgATCCACACACCATAGTTTTTAAAATGTTATTTTACTCACAAGAGGGCTTTGGAAAGGAAGATCCTGCCCAGCAGAGCCTACATGCGCAGACAGGACAGAGGACCCTTAAGGATCAATGGTCTTGTTGCCGGAAATGGATGTCTGGCGCAACCCCCGGAGCTAGTTTTGGGGAGGCCGCCTTGTTGACTGTGCACTGGAAAATGCACATTGCTTTATCGTGAGCTCTCGGTGCACAGTGTGGTTTCCAGGCTCTGAGTGGCCAATAAAGCTGGTGCTGTCTTAAA