Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name MRPS6
Plot displaying the genomic locations of a parental gene (in chr21) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein S6
Also known as C21orf101|MRP-S6|RPMS6|S6mt
Coordinate chr21:34073578-34143030
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that belongs to the ribosomal protein S6P family. Pseudogenes corresponding to this gene are found on chromosomes 1p and 12q. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPS6

Retroname Coord Strand Genomic Region ENSG
MRPS6P3 chr1:26262527-26263385 - Intragenic
 ENSG00000270733 UCSC
MRPS6P2 chr1:50846396-50847259 + Intragenic
 ENSG00000237130 UCSC

Expression

Transcript Sequences

>NM_032476.4
GCTTTCGCCGCCTGGGAGCCGTCCGGCGCAGCAGTTTCTAGGTCCCCACTGTCCCCGCCGTCCCGCCCCTTCGCGTCCCGGGAACCGGCTGGCTTCCGAGCCGCACTCGCCGATCCTCCAGGCATGCCCCGCTACGAGCTGGCTTTAATCCTGAAAGCCATGCAGCGGCCAGAGACTGCTGCTACTTTGAAACGTACGATAGAGGCCCTGATGGACAGAGGAGCAATAGTGAGGGACTTGGAAAACCTGGGTGAACGAGCGCTTCCTTATAGGATCTCTGCCCACAGTCAGCAGCACAACAGAGGCGGGTATTTCTTGGTGGATTTTTATGCACCCACCGCAGCTGTTGAAAGCATGGTGGAGCACTTGTCTCGAGATATAGATGTGATTAGAGGGAATATTGTCAAACACCCTCTGACCCAGGAACTAAAAGAATGTGAAGGGATTGTCCCAGTCCCACTCGCAGAAAAATTATATTCCACAAAGAAGAGGAAGAAGTGAGAAGATTCGCCAGATTTTAGCCTTATATGTAATTCCTTCACATTTGGGCAGCATGGACGAGAAGGAAGAATTTGCAAGTTTGGCCTTTATATAAGCATGTGTTGCAGGTGCTGTTTGATTTTTCTAAGGTATTTTTAGCCCTTGATCCCCTTTGCTTGCGAGAGGTGGGGAACTGCTCACTGACAGCTTCTCTGTAACCTGCAGTACCAGTGGATCGTTCTTGATTTTGTTTTCATTAGTGTCATTTCTTTGTCATTGAGGACTTTTCCCCTTACAACAGTAACACCATTTTTTGAAGAGCAAAACTTATAATACCTCCTGGGATTGTGAGCTAGTCATTCAGCCTGTGTAACCATGTGGAAATAAAAATTGACGACCAATGTATTATATGGACAACTTTTGCTTTGAGTAATAAACTTGATTGTAGGAA