Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name MRPL40
Plot displaying the genomic locations of a parental gene (in chr22) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name mitochondrial ribosomal protein L40
Also known as L40mt|MRP-L22|MRP-L40|MRPL22|NLVCF|URIM
Coordinate chr22:19432545-19436075
Strand +
Gene summary Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. Deletions in this gene may contribute to the etiology of velo-cardio-facial syndrome and DiGeorge syndrome. [provided by RefSeq, Jul 2008]

Retrocopy(s) from MRPL40

Retroname Coord Strand Genomic Region ENSG
MRPL40P1 chr12:67351517-67352155 + Intergenic
ENSG00000256037 UCSC

Expression

Transcript Sequences

>NM_001318151.2
GAGGGTAGCCATGACGGCCTCCGTGCTGCGAAGTATCTCGCTAGCCCTGCGCCCGACTAGCGGGTGAGTGCGGACGCTGGCCGGATAGCGGAGTGCCCAGGGCGCGTGCGGGGTCTTCGCGACTGTCCGCCAGGACTCGCCTGTGCTCCCTGCTCGCCTCCCAGTCCACGAATATCTCAGGGATGAGCCATCTGGTCGTGACTCTTATGCATGAAAATCTGAGCACCCTGGCGAGCAGCGGTCCTGCTTAAGTCCTCTGTGGTCTGAACGAAAGATTTTGAAAAACCTTCCACGTTGACCTTGCTGTCATATCAAGCTTCTGGGAACTTGGCAGACGCAGCTTAGAGAGACTCACCAGCGAGCGTCATTGTTGTCTTTCTGGGAACTCATTCCCATGAGATCAGAACCTCTTCGAAAAAAGAAGAAGGTAGATCCTAAAAAAGACCAAGAAGCAAAGGAGCGCTTGAAAAGGAAGATCCGAAAACTGGAAAAGGCTACTCAAGAGCTAATTCCTATTGAAGATTTTATTACCCCTCTAAAGTTCTTGGATAAAGCAAGAGAGCGGCCTCAGGTGGAGCTCACCTTTGAGGAGACTGAGAGGAGAGCTCTGCTTCTGAAGAAGTGGTCCTTGTACAAGCAGCAAGAGCGTAAGATGGAGAGGGACACCATCAGGGCTATGCTAGAAGCCCAGCAGGAAGCTCTGGAGGAACTGCAACTGGAATCCCCGAAGCTCCATGCTGAGGCCATCAAGCGGGATCCTAACCTGTTCCCCTTTGAGAAGGAAGGGCCACATTACACACCACCGATCCCTAACTACCAACCCCCTGAAGGCAGGTACAATGACATCACCAAGGTGTACACACAAGTGGAGTTTAAGAGATAGACTTGCAGGCTGCTATCCTTAACATGCTGCCCCTGAGAGTAGGAATGACCAGGGTTCAAGTCTGCTTTCCACAGAATCAGGCATGCTGTTAATAAATACTGGTTTAATCAAAA