Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl23
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L23
Also known as 2810009A01Rik
Coordinate chr11:97668352-97673265
Strand -
Gene summary Predicted to enable several functions, including transcription coactivator binding activity; ubiquitin ligase inhibitor activity; and ubiquitin protein ligase binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in several processes, including cellular response to actinomycin D; negative regulation of nitrogen compound metabolic process; and protein stabilization. Predicted to act upstream of or within translation. Located in nucleolus. Is expressed in several structures, including central nervous system; retina; and uterus. Orthologous to human RPL23 (ribosomal protein L23). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl23

Retroname Coord Strand Genomic Region ENSG
Rpl23P9 chr10:75454879-75455365 - Intergenic
ENSMUSG00000112643 UCSC
Rpl23P10 chr11:77530680-77530893 + Intergenic
ENSMUSG00000082646 UCSC
Rpl23P11 chr13:114574317-114574777 - Intergenic
ENSMUSG00000114520 UCSC
Rpl23P12 chr14:105421416-105421591 - Intergenic
ENSMUSG00000115831 UCSC
Rpl23P4 chr3:121617041-121617406 - Intergenic
ENSMUSG00000105889 UCSC
Rpl23P7 chr6:66852257-66852754 - Intergenic
ENSMUSG00000107176 UCSC
Rpl23P16 chrX:41977566-41977898 - Intragenic
ENSMUSG00000083098 UCSC
Rpl23P15 chrX:141405453-141405890 - Intergenic
ENSMUSG00000081568 UCSC
Rpl23P1 chr1:156563481-156563752 + Intergenic
N/A UCSC
Rpl23P2 chr1:173311091-173311264 + Intragenic
N/A UCSC
Rpl23P3 chr3:108136823-108137052 + Intergenic
N/A UCSC
Rpl23P5 chr3:39498076-39498498 + Intergenic
N/A UCSC
Rpl23P6 chr4:8461433-8467611 + Intergenic
N/A UCSC
Rpl23P8 chr9:44473522-44473676 + Intragenic
N/A UCSC
Rpl23P13 chr15:8450110-8450361 - Intragenic
N/A UCSC
Rpl23P14 chr16:24895589-24895739 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_022891.3
GTGGCTGAGTGGGCGGGGCCTCCCGTTCATATCCCAGTGTCCCCTGTACTAACTTCCTTTCTGACCCTTTCCGGGCGTTCAAGATGTCGAAGCGAGGACGCGGTGGGTCCTCCGGGGCGAAATTCCGGATTTCCCTGGGTCTTCCGGTCGGAGCTGTGATCAACTGTGCAGACAACACAGGAGCTAAAAACTTGTATATCATCTCTGTGAAGGGAATCAAGGGACGGCTGAACAGACTTCCTGCTGCTGGTGTTGGGGACATGGTGATGGCCACAGTTAAGAAAGGCAAACCAGAACTAAGGAAAAAGGTACATCCAGCAGTGGTAATTCGACAACGAAAGTCATATCGAAGAAAAGATGGGGTGTTTCTTTACTTTGAAGATAACGCAGGGGTCATAGTAAACAATAAAGGAGAGATGAAAGGCTCTGCTATCACAGGTCCAGTGGCAAAGGAGTGTGCAGACTTGTGGCCCAGAATTGCATCCAACGCAGGCAGCATTGCATGATTCTCCAGtgtatttgtaaaatatattcattaaagTCTCTGCTCTGAGAGCTGGTCTTCTTGACACCTTTTCCAATATCAGCTTTGCAGAAGGAAACTTAAATTTCAGTTCAGGGCATGACCTTCATGACCTTGCAGAACTTCTTCACTTTCCAGGTTAAGTAAAGGCGATCTTTAGGGGCTGTCCAGATGGATCAGCTATAAAGATTCAATTGTAGAAGGTTCACGTCTCAATGCCCACGTGGTAGCTGTAacttcaattaaaaaacaaaaacagccgggcgtggtggtgcacgcctttaatcccagcacttgggaggcagaggcaggcggatttctgaggccagcctgatctacagagtgagttccaggacagccaggaatacacagagaaacccttgtctccaaaaaccaaaaaaaacaaaacacgcaTTCTTTTCAGGTCTTTGCTGGGACCAGGTACACATAACACAGATAAATATTAGAGCAAACCATGCACATATGGTAAATTATCTTTGGGTTTTGGGTCCCTAAAATAAAGTGGTGTGTTCATTGTG