Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Abo3
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name histo-blood group ABO system transferase 3
Also known as Abo|Abol1|Gbgt1
Coordinate chr3:5109880-5127376
Strand +
Gene summary Enables glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity. Involved in defense response to bacterium. Predicted to be located in Golgi cisterna membrane and extracellular region. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and vesicle. Human ortholog(s) of this gene implicated in several diseases, including Plasmodium falciparum malaria; gallbladder carcinoma; leukemia (multiple); lung disease (multiple); and severe acute respiratory syndrome. Orthologous to human ABO (ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Abo3

Retroname Coord Strand Genomic Region ENSG
Gbgt1P1 chr15:60399932-60400141 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_023094.3
ATGGACCTCAGAGGAAGACCGAAATGCTACTCACTTCACCTTGGAATCCTTCCCTTCATTGTGCTTGTCTTAGTCTTCTTTGGCTATGGATTCCTGAGCCACAAAATCCAGGAATTCAGGAACCCAGGAGGTGAGACTTGCATGGCTACCAGGCAGACGGATGTCCAGAAAGTTGTAAGTGTGCCAAGGATGGCCTATCCACAGCCAAACGTGCTAACACCCATTAGGAATGATGTTCTTGTCTTCACTCCTTGGCTGGCTCCCATCATCTGGGAGGGGACCTTCAACATCGACATACTGAATGAGCAGTTCAAGCTTCAGAATACCACAATTGGACTGACTGTGTTTGCCATCAAAAAGTATGTGGTGTTCCTGAAACTCTTCCTGGAGACGGCAGAGCAGCACTTCATGGTGGGACACAAGGTCATCTATTATGTATTCACTGACCGGCCATCTGATGTGCCACAGGTGCCCCTGGGCGCAGGGCGGAAGCTGGTGGTGCTAACTGTGCGCAACTACACCCGCTGGCAGGACGTGTCCATGCACAGGATGGAGATGATCAGCCACTTCTCAGAGCAGCGCTTTCAGCATGAGGTGGACTATCTGGTGTGTGGAGATGTGGACATGAAGTTCAGTGACCACGTGGGTGTGGAGATTCTCTCAGCGCTCTTTGGCACCCTGCATCCTGGCTTCTACCGTAGCCGACGAGAGTCCTTTACCTATGAGCGCCGGCCAAAGTCTCAGGCCTACATCCCCAGGGATGAGGGTGACTTTTACTATGCAGGGGGTTTCTTTGGGGGATCAGTGGTGGAGGTGCACCATCTCACCAAGGCCTGCCACCAGGCTATGGTAGAGGACCAGGCCAATGGTATTGAGGCTGTGTGGCATGACGAGAGCCATTTGAACAAGTACCTGCTATACCATAAGCCTACAAAGGTGCTGTCCCCAGAGTATGTGTGGGACCAGAAGCTGCTGGGCTGGCCCTCCATCATGAAGAAGCTGAGATATGTGGCCGTGCCCAAGAACCATCAGGCGATCAGGAACTGA