Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Cwc15
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name CWC15 spliceosome-associated protein
Also known as 0610040D20Rik|2900052N06Rik|Ed1|c11orf5|mED1
Coordinate chr9:14411876-14421920
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in mitochondrion and nuclear speck. Predicted to be part of U2-type catalytic step 2 spliceosome. Orthologous to human CWC15 (CWC15 spliceosome associated protein homolog). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Cwc15

Retroname Coord Strand Genomic Region ENSG
Cwc15P2 chr10:97078055-97078389 + Intergenic
ENSMUSG00000111981 UCSC
Cwc15P1 chr4:91994786-91995407 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_023153.3
TTGCTTCCGGGTCTCAACCGAGCCCCTGGTGTAAAAACTGGAAGCTCTGCATTTTGTTTCCGGTCTTGGGCCTGGCGCCCCCGGCGCCGAGATTTCTGGGAGCTAAGGGTCGCATTGGTTCATGAGTGAGTTTCGGAAGGTGCTGCGTAGGACCCCCGCCAGAACTAAAAGATGACAACAGCAGCCAGGCCAACTTTTGAACCTGCAAGAggtgggagaggaaaaggagaaggggattTGAGCCAGCTCTCCAAGCAGTATTCAAGCAGAGATCTTCCCTCTCATACAAAGATAAAGTACAGACAAACCACACAGGATGCCCCTGAAGAGGTTCGAAACCGTGACTTCAGGAGAgaactggaagagagagagagagctgctgcAAGGGACAAAAACAGGGACCGCCCAACTCGAGAGCATACAACTTCCTCTTCAGTGTCAAAGAAGCCCCGCTTAGACCAGATTCCTGCTGCCAACCTTGATGCTGACGATCCTCTCACAGACgaggaagatgaagatttTGAAGAGGAGAGCGATGACGATGATACTGCAGCTCTTCTCGCAGAGCTAGAAAAGATCAAGAAGGAAAGAGCTGAAGAGCAGGCCAGGAAGgaacaagaacaaaaagcagaggaagagagaattcGCATGGAAAACATTCTGAGTGGAAACCCTCTCCTAAACCTCACTGGCCCGTCCCAGCCTCAGGCCAACTTCAAGGTTAAAAGAAGatGGGATGATGATGTCGTTTTTAAGAACTGTGCAAAAGGTATAGATGACCAGAAGAAAGACAAACGATTTGTAAATGATACACTGCGATCTGAATTTCACAAGAAGTTCATGGAGAAATATATTAAGTAATATAGTTTTATGTGCTTAATTAAAAACTAAACTGTTAAGGatcaatttgacttttttttttggtttctgttctttCCCAGTGTTAACTTTCTCAGTCTCTTTCCCTTAGTGTAGTACTTTATTAGATAATGGGTTTAGAAATGGATCTAACCAGGccttagtttctttttaatatgggAAACGGGGAATCTGcttgtaataaatatttttaacctAAATAAACCACTGTCCCCAACTTTTTGCTACAATTTATACAGCTTATAAAAAGTTGCataatttcttttcaaaatg