Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Setd6
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name SET domain containing 6
Also known as 0610039J04Rik|3110004G14Rik
Coordinate chr8:96442211-96448135
Strand +
Gene summary Predicted to enable NF-kappaB binding activity; S-adenosyl-L-methionine binding activity; and protein-lysine N-methyltransferase activity. Involved in stem cell differentiation and stem cell population maintenance. Predicted to be located in chromosome; cytosol; and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and neural retina. Orthologous to several human genes including SETD6 (SET domain containing 6, protein lysine methyltransferase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Setd6

Retroname Coord Strand Genomic Region ENSG
Setd6P1 chr16:32409840-32411007 - Intergenic
 ENSMUSG00000083903 UCSC

Expression

Transcript Sequences

>NM_001368354.1
AGTGAGGACCCGGCTGCTCGCAGCATGGCGGCCCCCGCCAAGCGCGCGCGGAGCGAGGCGCGCTGCAGAGCCTGTCTGGGTGGGTGCCGCTGCTGCTGGCGCTGCTCCACGAGCTCCAGGCCCCAGCATCACCCTGGAGCCCTTACTTCGCGCTCTGGCCAGAGCTGGGGCGTTTGGAGCATCCCATGTTTTGGCCGGAGGAAGAGCGGTTGCGACTCCTAAAGGGTACAGGTGTCCCCGAAGCCGTGGAGAAGGATTTGGTGAACATCCGTAGCGAATACTATTCCATCGTCCTGCCCTTCATGGAGGCTCACTCggatctcttcagcccctctgtTCGCTCCCTGGAACTCTATCAGCAGCTCGTGGCCCTCGTGATGGCTTATAGCTTTCAAGAACCGCTggaggaagatgatgatgaaAAGGAGCCCAACTCACCCTTGATGGTGCCTGCTGCAGACATACTAAACCACATAGCCAATCATAATGCCAATCTAGAGTACTCGGCAGATTATCTCCGGATGGTGGCTACTCAGCCCATTCTTGAAGGTCATGAAATCTTCAACACATATGGGCAAATGGCTAACTGGCAACTGATTCATATGTATGGTTTTGCTGAGCCCTATCCTAACAACACAGACGACACGGCTGACATTCAGATGGTGACAGTCCGAGATGCTGCACTGCAGGGAACAAaggatgaaactgaaaagctgctCGTGTGTGAACGCTGGGATTTCCTGTGCAAACAGGAGATGGTAGGGGAAGAGGGAGCCTTTGTGATAGGTTGTGAGGAGGTGCTGACTGAAGAGGAGCTAGCCACCACACTGAAGGTACTGTGCATGCCTGCTGAGGAGTTCAGAGACTATAAAGAGCGGGCTggatggggagaggaggagacagaagacGACAGTTTGGCAATCACAGATATCCCCAAGCTCCAAGAATCATGGAAACGGCTTCTTCGAAACAGTGTTCTGTTGACCCTACAGACCTACACCACAGACTTAAAAACAGACCAGGACTTACTCAGTAATAAGGAGGCCTATGCCACGCTGAGCTGGCGCGAACAACAAGCCTTACAGGTCCGCTATGGTCAGAAGATGATCTTACATCGGGTGTTGGAACTCACAAATTAAGCAGGCTTCCTGAGAACCTTTTAAGGTCATGTTCTGTTGCTTGGAGAGGAGGGAAATTTGGGACTTTTGCTATTTGGCAGTTAGAATCAAAGGAAAAATAGCTAAAAAGTAAACTTACATGTCGGCACGTTTGGATTGATGTCAGCAGATTTAGGAGCATGCTATTTTTACTAATGCCATCAGATTTTTTTAGAACTTAATAAACATGGGCTGAGTTCAACTTTGA