Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Ska2
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name spindle and kinetochore associated complex subunit 2
Also known as 1110001A07Rik|Fam33a
Coordinate chr11:87000087-87013800
Strand +
Gene summary Predicted to enable microtubule binding activity. Predicted to be involved in several processes, including chromosome segregation; mitotic cell cycle; and regulation of microtubule polymerization or depolymerization. Predicted to be located in cytoplasm; kinetochore; and microtubule. Predicted to be part of outer kinetochore. Predicted to be active in spindle microtubule. Is expressed in several structures, including alimentary system; brain; early conceptus; genitourinary system; and respiratory system. Orthologous to human SKA2 (spindle and kinetochore associated complex subunit 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ska2

Retroname Coord Strand Genomic Region ENSG
Ska2P1 chr1:150425056-150425636 + Intergenic
ENSMUSG00000101519 UCSC
Ska2P3 chr11:30772095-30772681 - Intragenic
ENSMUSG00000086986 UCSC
Ska2P2 chr9:77758988-77760226 + Intergenic
ENSMUSG00000111580 UCSC
Ska2P4 chr14:106594700-106594983 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_025377.3
AACTATTCAATATGGAGGCGGAGGTCGATAAGCTGGAACTGATGTTCCAGAAAGCTGATTCTGATTTGGATTACCTTCAATATAGGCTGGAATATGAAGTCAAGACTAATCACCCACATTCAGCAGGAGAGAAAAATGCAGTTACAGTTTTAAAGGAATTATCAGCGATAAAGTCTCGCTATCAAGCTTTATGTGCACGCTTTAAGGCAGTTTCTGTTGAGCAAAAGGAGACCAAGAGCTGCATTTGTGCTACTTTGAACAAGACAATGACCATGATACAAGAactacaaaagcaaacaaacctggaGctAACTCTACtgactgaagaagagaaagcTGCAACAGAGCCATTAAAATCTCATATGCCGGACTgataaaaaatgttaaagaggAAGGCTGGTGGAAAGAAGACCAACTGCAGAGATTGGGCGAGACGTCTAGAGGCGGGGCTGATGAGGAAGCCTGACATTTCCCTTGACCGAGAGGATCGTGATGCATTTCAGATGAGGAAATTGTAAGAAGCGTAGATGTCCTGTGACTGAAAACCAAAAGGATGGGATGGAAATAAAGCAATGTAAATACTGATACCCAGCATTCATTTTAGGCAATGAAATCCCTtagtactacttttttttttattttctgttttctttttgtatagTGTTGGCATAATTTTAGATGTTTTGGgattttgtaaaataatatttatgtacATTTTGTTCAGTATGTAAATGGGCAAAATACTTGTATAAAAATTCAGGTGTTGTttgctcttttgagacaaggtttcactatgtagctctggctggccctggagctcactatgtagaccagaccagcTCTGAATCCTAAAGATGCCTGCCTTTGCTATCACGCTGggcattgtctgtctgtctgtctgtgacaaGGTCTtccatatcccaggctggcctcagatttggTGTCAATAGGGATAATATTTGACATTggtacttcctgagtgctgggataccCAGTGTGCAGAAGCACGTCTGGTTTGTGTAGTACCAGCTAGCACGGCtcagctgagccacatcccaaccctgtatttttttttctttaatgtacaTTACAGTTAATAACACacttacttgtatgtatatactGTCCAGTTTTCCCAAAATCTAACAAATTAATAGGATGTTTTGtgagaacttttattttttttttcctttttcccattGCTTGCTAGTAATAAAACATCATTAGTTTGTTTTCAAATGCTGTTTTAGACTTTCTATTGGTGTTACAATAATATGTTATCTTTCAGTGtagttttgtatttgtttattctaTATGAATGACAGACTAAAATCACTGACACATCTGCT