Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Nip7
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name NIP7, nucleolar pre-rRNA processing protein
Also known as 1110017C15Rik|6330509M23Rik|PEachy
Coordinate chr8:107783509-107787563
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in cytosol and nucleoplasm. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nucleolus. Is expressed in several structures, including alimentary system; central nervous system; liver; nasal cavity epithelium; and vibrissa. Orthologous to human NIP7 (nucleolar pre-rRNA processing protein NIP7). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nip7

Retroname Coord Strand Genomic Region ENSG
Nip7P2 chr19:16467383-16468486 - Intragenic
ENSMUSG00000117699 UCSC
Nip7P1 chr3:101112314-101114715 - Intergenic
ENSMUSG00000082415 UCSC

Expression

Transcript Sequences

>NM_025391.2
GACTTCCGCTTCCGGCTCTCCAGGCACGAGGATTCCCGGGAGCCAAGCAAGCGGCAAGATGAGGCCCTTGACTGAAGAAGAGACCCGGGTCATGTTTGAGAAGATCGCGAAGTACATCGGAGAGAACCTTCAACTCCTAGTGGACAGACCCGACGGCACGTACTGTTTCCGGCTGCACAACGACCGAGTGTACTATGTGAGTGAGATGATGCTGAAGCTGGCCGCCAACATCTCCGGAGACAAGCTCGTGTCGCTGGGGACGTGTTTTGGGAAGTTTACCAAGACCCACAAGTTCCGCTTGCACGTGACAGCTCTGGATTACCTGGCCCCCTATGCCAAGTATAAAGTGTGGGTAAAGCCGGGAGCAGAGCAGTCCTTCTTGTATGGAAACCATGTGTTGAAATCCGGTCTGGGTCGAATTACTGAGAACACATCTCAGTACCAGGGAGTGGTTGTCTATTCCATGGCGGACATTCCTCTGGGTTTTGGGGTGGCAGCAAAGTCTACCCAAGACTGCCGAAAAGTGGACCCCATGGCAATTGTGGTGTTCCACCAAGCAGACATTGGGGAGTACGTACGCCATGAAGAGACACTGACTTAGGACGGTCATTCCAAGAACATTTTGCTgtgtgagaggacttagctttgTTTCCTGTGTGCGGCCATCAGATTAAATCTGGACAACACTGAGATACGCAACTTGGGTTCTTATCAACAGAAATGGCGTGAAAACAGGGTCTCTGGCCCTCTAGAGTCAAAAGCAGGTGGATCACAAGTATaaggccagctcaggctacttggagagttcaaggctagcctgggctacatagtgagccttgtctcaaaaatctaaAACAGACAAACCAGAACCTGAGAGTGTTTTGTGTGAGTAAATAgagtgtttctgttttgtgtctgcGTCGTCTTTGTTTGGATCAGAAGACTTGCTCTGAGTGATGGTTTCTAAGTTACTTCACTGAGGACAGGAGCCATCTTACTGTTATCTGTGATAACACTGTTTTCCAGGCTCATGATAGCACAGTGGACTTTCTATTGTGTGTTAATGTTAAAGGTAGAAACGGCCATATGAGCCTCTGGTTTTACATatggaatttaataaattttaatggttttatatttgttatttcatatgtgtgagtgttttgttggCATGTACGTATGTGCACTGcttatgtgcctggtgcctaaggAAGTCAAGGTGATTTCagacctggaactagagttactggttgtgagccaccgtataGGTGCcagaaattaaactcaggtcctctgcagggacagcagtggtcttaaccactaagctatcctAATAAATTTAATAGGTGCATTTTGGCTATTTTTCTTGGTGTTAAGTGGGGTATAGCGTGGAAGCGTCTGTATTCAAGCCTCAGTTCTGCCCCTTGCCAGCTGTGGTGGTGGACAAGTTCTCTGCTTAGAGaggcttcattttcttcctttgttaaaagaaaaaacccatgACCCTGCCGTatggtggtgcatatctttaGTTACAGCACGGGGGCTTGAGggtgaggcaaaggcagatggagctctataggttcaaggccagcctggtctacataaggagATCCTGGCCAGTCTTAAACCCAAAACccacaaaactgaaaaaacaCCTCCAGTCATCAGTGTAACAGTGATATTCAGAATTAAAAATAGCAgttgtaggggctggtgagatggctcagtgggtaagagcacccgactgctcttccaaaggtccggagttcaaaccccagcaaccacatggtggctcacaaccatccgtaacaagatctgactccctcttctggagtgtctgaagacagctacagtgtacttacttacatataataaataaataaaaaatagcagTTGTAAAGCATCCTGCATGGGATAGAgttatcctgtctcaaaacaggaaATTGTTCGTgcgtgtctgtgtgagtatatcCTGCTTGGGTAGCGGTATCCTCAGAGGGCAGAAAACACTTGGGATTCCTTGGAGCCTGAGGtaaggacagttgtgagctggccattgttggtgttgggaaccaaacttcaGTCCTCTAAAAGAGAATGTTctttctgaactgctgagccatcttccctgtCTGTGTTAAAatgattttgttacttttttttttttttaattgaaacaaGTTCTGACTATGTATCTCTGCTTAGAatgtacccaggctggcctcaaactcaaggatCCATTGATtctgaagtgctgagattaaatgggTATACTACCATACCAGGCTCAATTCCCccacctcccttttttttttgtttttgtttgttttttttgtttgttttgtttttgtttgttcttttgagacagggtttctctgtagccctgactgtcctggaactcattctgtagaccaggctggcctcaaactcagagatctgtttgcctccaAAATACTGGCCTTAAAAAATGTGCCCCACCATGCctaacttcagaacaatttctttttctttttttttgagacagggtttctctgtatagccctggcagtcctggaactcactttgtagaccaggctggcctcgaactcagaaatccacctgcctctgcctcccgagtgctgggattaaaggcatgcaccaccacacccggcagaaCAGTTTCTTAAGATATGATCAGGTTATGTCAGTTTTAGggggcatttttattttttgagacatttgtCACATTATATCTAAGTTGGTCTGAAATGCTATGGGACCCAGGCTGTCTTAGCCTCTCAGGTAATGGTATTATAGGTCTGTCGCCACACCAGTTTCCAATGGTAACAtcttttaaataaagtaaaatatttccaACCGTTGAAGGGCACTACAGGCCaagaagatagctcagtggacaGCCTGGTAGGGTGGATcagccatgtgccaccaagcctgatgctgtgttcaatccctgggacaaGGTTGAAGGTGGGGACATTGCTGACCTTTGTAGTCCTCTACAAtggattaaaattttttaaactccaaaaa