Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ubl5
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ubiquitin-like 5
Also known as 1110030M22Rik|Ubl5a|beacon
Coordinate chr9:20554013-20558436
Strand +
Gene summary Predicted to enable protein tag. Predicted to be involved in cellular protein modification process and mRNA splicing, via spliceosome. Predicted to be active in cytoplasm and nucleus. Orthologous to human UBL5 (ubiquitin like 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ubl5

Retroname Coord Strand Genomic Region ENSG
Ubl5P2 chr11:69522245-69522427 - Intergenic
 ENSMUSG00000083300 UCSC
Ubl5P1 chr1:77040245-77040480 + Intergenic
 N/A UCSC
Ubl5P4 chr16:82238940-82239090 + Intergenic
 N/A UCSC
Ubl5P5 chr19:30907782-30908166 - Intragenic
 N/A UCSC
Ubl5P3 chr12:87690910-87691265 - Intergenic
 ENSMUSG00000113489 UCSC

Expression

Transcript Sequences

>NM_001361025.1
GGAAAACCTGGATGTGGCTTGGTGGAGGAGGGGGCACGAGGCGTGGCCAGGGCCAAGAGGAAGGCTAACAGCAAATCCAGAAGGCTGAAGGCTTAACTCCGGCCGGGGTTCCTCGCTCGAGCTACGAGTTGTGTCGTCGATAGGTTCGAGGATATTGGAGCTCCAGCCACAATGATTGAGGTGGTTTGCAACGACCGTCTCGGAAAGAAAGTCCGCGTTAAGTGCAACACCGATGACACCATCGGCGACTTGAAGAAACTGATAGCTGCTCAAACTGGCACCCGCTGGAACAAGATCGTTCTTAAAAAGTGGTACACGATTTTTAAGGACCACGTGTCTCTGGGAGATTATGAAATCCACGATGGGATGAACCTGGAGCTTTATTACCAGTAGAGGGGGATTCCTTCTCCTCCTCGccctgctctgccctgccctcCTCTCCCATCCTCATCTGACACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGGCTGCTGCTTTGCTGCTGTCATA
>NM_025401.4
AGTGGCGTGCGGAGGTTTGGCTTGTGCTGGAAAAGGCTTAGGGTTACTGCCAAGGCAGAGATCAGCCTGCGACCAGACCGTATGTATACCCAGGAGGCATGACTTGAGCAGGGAAAAGTTAACAGAGCAACAAACCCAGAAACCATGACTTGTGTGGGAAGGGGCTCAAGGACTAGGGATCCTAATTGCGCCTGAAGACTAAACTTGTAAAACCTAGCTTAGGCGGAACAAGGTCCGATATAGGGGATGGAATCAAGTTTGGAATGGCTGGGCGACAAAGGGACAGGCTGGGAGACTTATGACTGGAAGAATGGATAAGAGCAGCGACGGGGGCCCTAAAAGCATCGCTGGAGACAGAAACAAGAGCTAAACCAGGAACTGGGTGtgcagctcagtgggagagccttTGGCTGGTAAGCATGCTTAGCAGGCCCTAGGTTCGACCTCCAACACTAaaacaaataccaaaacaaaacaagaaaaacaaaccccaCCACTTTTCTTGTATGTATGCCAAGAGACTTAAAGCCTGAGAAGTTTTTTTTCGAGACGGAAACGAATCCGGTAAAGCCTGAGAAGTCTTTTCAGGACGGAAACGAGGCATTGGGGAGACTGGAACATATCTAAGCACTAAAGACACAGAACAGGACTTCATTCGAAACTGAAAGGTGTGACTGGGATGGGAGTGAGGGGCCAGCAGGACGGCCAAGCCAGGGAGGCGTGGCCACAGCCGCAATAGAAAGCAAGAATAATGCCTTTTGCTGCCTACGCATAAGGATTAAATTTTGTATAAGTCGTATTAGGTAAGCACAAGGCGCTGGgtaagacttttctttttcttgagtcaATATATGCTTACCTTGCTAAGAATCCTGTCTGCTAAGAAGAAATCGCTCAATAGAGGCAAAACTGGTTGAATTTAAGAAGGGATTCCTCTCCCACCAGCTCTCGCGATTCTTTAATCTGGAACAAGATTAAAGAATCAAAGCAAAAGCTCTTTCCCCGTATGCTATTTCCAACATCTTCGCAGGCAGGACACGGACACGCGGAGTGGTACGCAACATGCATGGCCTCTCAACCAGGATCCGACTTAGTTTTCATCAACTGCAGCCTGCACCCCTGGAGTCTCTGAAACGGTCACTACGACCAGGGGCGGGGAAGCAAGCACAGGGTTTGAGGCTGAGCTTTGAATGAAAGCAGAAAGCCACAGGCCCTGCATGACTCCATTTCGGCACACCTGCAGCCGGGATTCCGCGGTAGGAGGATTGTCTGGCTTGGGAGTAGTCGAGCACCCCGCCGCTGAGATCCTTTAGGTTTCTTCCATGATGAAGGAATCTCCAACACCAGTTCCAACGTCCGCTGTAAATCCATTCTTAGCAAGTCCCAGCTCATCCACACTGCGCAACAGAATCGCAAATCCTAGCCCGGAACCCGGAAGCACCTAAGGGCCGGTGGTTCCGTTATATCACTTCCGCTTCCTGTTTGCAGGCTTAACTCCGGCCGGGGTTCCTCGCTCGAGCTACGAGTTGTGTCGTCGATAGGTTCGAGGATATTGGAGCTCCAGCCACAATGATTGAGGTGGTTTGCAACGACCGTCTCGGAAAGAAAGTCCGCGTTAAGTGCAACACCGATGACACCATCGGCGACTTGAAGAAACTGATAGCTGCTCAAACTGGCACCCGCTGGAACAAGATCGTTCTTAAAAAGTGGTACACGATTTTTAAGGACCACGTGTCTCTGGGAGATTATGAAATCCACGATGGGATGAACCTGGAGCTTTATTACCAGTAGAGGGGGATTCCTTCTCCTCCTCGccctgctctgccctgccctcCTCTCCCATCCTCATCTGACACTGGTGTAGATGGTCATTTTTAACAGTTCACATGAATAAAAACTTGGCTGCTGCTTTGCTGCTGTCATA