Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Sec61b
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name Sec61 beta subunit
Also known as 1190006C12Rik
Coordinate chr4:47474661-47483233
Strand +
Gene summary Enables ribosome binding activity. Predicted to be involved in intracellular protein transport and ubiquitin-dependent ERAD pathway. Predicted to act upstream of or within protein transport. Located in endoplasmic reticulum quality control compartment. Orthologous to human SEC61B (SEC61 translocon subunit beta). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Sec61b

Retroname Coord Strand Genomic Region ENSG
Sec61bP3 chr15:100194998-100195506 + Intergenic
ENSMUSG00000116182 UCSC
Sec61bP1 chr5:105136739-105137250 - Intergenic
ENSMUSG00000106392 UCSC
Sec61bP2 chr13:98625869-98626329 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_024171.2
AGAGCCTGTATCTACGAGAGTTCTGAGTGCTCGGCAACTTCACGACttccctcttcctgcctcctgtgCCCACCGTTCTTAGGCATCAGCATGCCGGGTCCAACGCCCAGTGGCACCAACGTGGGCTCCTCTGGCCGCTCTCCCAGCAAAGCGGTGGCCGCACGGGCTGCGGGATCCACTGTTCGGCAGAGAAAAAATGCCAGCTGTGGGACCCGGAGCGCAGGCCGCACCACCTCTGCAGGGACTGGGGGGATGTGGCGATTCTACACGGAAGATTCCCCAGGGCTCAAAGTGGGCCCTGTCCCAGTGCTGGTGATGAGTCTTCTGTTCATCGCTGCTGTATTTATGCTGCACATTTGGGGCAAGTACACGCGATCATAGATTGGGCTACATCCATCTGtcatctgaagaagaagaagaaggaaaaaaacccaacatatCTTGGACCAAAAGTGTAGTGATTTTCTGTTCACGTGTATTATTTTACAGAGAATAAGAATTGACTTTGAGAAATCAGTTTTTTCTATGGCTAATAAACTTTGGAATTGCTTT