Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Trappc2
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name trafficking protein particle complex 2
Also known as 1110066L09Rik|1810064C02Rik|MIP-2A|Sedl|TRS20
Coordinate chrX:165223751-165236136
Strand +
Gene summary Predicted to enable transmembrane transporter binding activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; regulation of transcription, DNA-templated; and skeletal system development. Part of TRAPP complex. Is expressed in several structures, including eye; genitourinary system; gut; hemolymphoid system; and nervous system. Human ortholog(s) of this gene implicated in X-linked spondyloepiphyseal dysplasia tarda. Orthologous to human TRAPPC2 (trafficking protein particle complex subunit 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Trappc2

Retroname Coord Strand Genomic Region ENSG
Trappc2P1 chr4:143337318-143338730 - Intergenic
 ENSMUSG00000044377 UCSC
Trappc2P2 chr11:51576470-51576903 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_025432.4
GAGAGTGATTTTGGGACTCCCAGGCTGAGGCTCCCGAGCGCAGATTAAAGAGGCGGCCGGTTCTCATCTCGGCTCCTCCCTACAGGAGCTGTGTATTGAAGACAATGTCTGGGAGCTTCTACTTCGTAATTGTTGGCCACCATGATAATCCAGTTTTTGAAATGGAATTTTTGCCACCTGGGAAAGCAGAATCCAAAGATGATCACCGTCATCTGAACCAGTTTATAGCTCATGCTGCTCTTGACCTTGTGGACGAAAATATGTGGCTTTCGAACAACATGTACTTAAAAACGGTGGACAAATTTAATGAGTGGTTTGTATCAGCCTTTGTCACTGCAGGGCATATGAGATTTATTATGCTTCATGATGTGAGGCAAGAAGATGGGATAAAGAACTTCTTTACTGATGTCTATGATCTGTATATAAAGTTTGCAATGAATCCATTTTAtgaacccaattctcccattcGATCGAGTGCATTCGACAGGAAAGTCCAGTTTCTTGGGAAGAAACACCTTTTAAGCTAAATGAGAACAACTCGGAAATCAGCTGTCTCATCGTGGGTATCAGGAAGGTGTGCTCTGTAAATCATTCGAAATTGCCTGGAAAACATCCCCTTAAAATTGTACTTTGTTTTCATGTTGACTATCAGCATTAATATTGGCTTGTGAACTGTGATATGTATAAACAACTCTTTACCAGTAGTtctgaacagttttatttaaaaacttgaGAAAACTTTTCTTGCCGAAGATAATATGATCTTAATTTATTAATTCAAAAGCATATGTCATAGTTAATATTTGTTAGATTGATTAAAGACTGAAAAGTTCTGGAGACATGACTGAAATGAGTTATTTATACATTTAGAGATGTCCTTTTAAAATGCATAATACACTGCAGTACcaagaagctgaagcagaaagCCCATGCCAAGTGTTCCATGCTTGCCTACCTCTGCCAGAGGCTGAGAATAACCGTCCTGCTGTAACTCTAGACCCCCTAGATCTATGTATGCTGCACCAGTTACAGGCCTTGGCAAAATGTGGTGCCTCTGTCACCTTACATTCTAGTGTTTCCTTTCTCTTAGTAAACTAGAGGTTTATTTGAATTTATTAGTATCTGTACTTGGAAAATGTTATAATATGGATTTAGTATTACTAATAAAAGCCTGGGTTACACTGACATTTGCACTTTACCTTTATGCTATATACAGGGTGGGAGGTGGCAGATGTGGCCTCTTGTATTAGAAATGTTGGTTTGATTTTACAGTAGTACATATGTATGGAAAAGCAAACCAGATTTTCATGTACACACTGGAAAATTTCTCTCCATTCTAACTTTTGAGTAAGTACTTCTAAACTTTCTTGTATTCTTTGGTGAAGTTATcatcactcttttttttatttcttaaataaatatttatatccaA