Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SNRPC
Plot displaying the genomic locations of a parental gene (in chr6) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name small nuclear ribonucleoprotein polypeptide C
Also known as U1C|Yhc1
Coordinate chr6:34757505-34773857
Strand +
Gene summary This gene encodes one of the specific protein components of the U1 small nuclear ribonucleoprotein (snRNP) particle required for the formation of the spliceosome. The encoded protein participates in the processing of nuclear precursor messenger RNA splicing. snRNP particles are attacked by autoantibodies frequently produced by patients with connective tissue diseases. The genome contains several pseudogenes of this functional gene. Alternative splicing results in a non-coding transcript variant.[provided by RefSeq, Oct 2009]

Retrocopy(s) from SNRPC

Retroname Coord Strand Genomic Region ENSG
SNRPCP5 chr11:3531402-3532183 + Intergenic
ENSG00000255522 UCSC
SNRPCP24 chr11:67905396-67906177 + Intergenic
N/A UCSC
SNRPCP14 chr11:71689872-71690653 - Intergenic
ENSG00000254805 UCSC
SNRPCP26 chr12:8340187-8340966 + Intergenic
ENSG00000277952 UCSC
SNRPCP18 chr15:101562615-101562881 + Intergenic
ENSG00000259464 UCSC
SNRPCP20 chr16:5288639-5289411 - Intragenic
ENSG00000267182 UCSC
SNRPCP4 chr18:2990649-2991145 + Intragenic
ENSG00000264186 UCSC
SNRPCP11 chr3:125815515-125816287 - Intergenic
ENSG00000241346 UCSC
SNRPCP8 chr3:130199710-130200492 + Intergenic
ENSG00000250580 UCSC
SNRPCP3 chr3:150719759-150720850 - Intergenic
ENSG00000244668 UCSC
SNRPCP10 chr3:75521800-75522561 + Intergenic
ENSG00000243794 UCSC
SNRPCP21 chr4:4057866-4058649 + Intergenic
N/A UCSC
SNRPCP16 chr4:9051265-9052051 - Intergenic
ENSG00000250342 UCSC
SNRPCP13 chr4:9583378-9584150 - Intergenic
ENSG00000249799 UCSC
SNRPCP2 chr5:76376637-76377441 + Intergenic
ENSG00000251235 UCSC
SNRPCP19 chr7:24906046-24906509 - Intragenic
ENSG00000234999 UCSC
SNRPCP9 chr7:97885867-97886651 + Intragenic
ENSG00000231812 UCSC
SNRPCP23 chr8:12549181-12549964 + Intergenic
N/A UCSC
SNRPCP6 chr8:7143059-7143841 - Intergenic
ENSG00000254683 UCSC
SNRPCP17 chr8:8116173-8116949 - Intergenic
ENSG00000254311 UCSC
SNRPCP1 chr9:32675841-32676547 - Intergenic
ENSG00000238001 UCSC

Expression

Transcript Sequences

>NM_003093.3
GCGTCACGTAACGGAGTGGCCAACGGCCTGCAGAGCAACATGCCCAAGTTTTATTGTGACTACTGCGATACATACCTCACCCATGACTCTCCATCTGTGAGAAAGACACACTGCAGTGGAAGGAAACACAAAGAGAATGTGAAAGACTATTATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGACAAAACAACGGCTGCATTTCAACAAGGAAAGATAcctcctactccattctctgctcctcctcctGCAGGGGCGATGATACCACCTCCCCCCAGCCTTCCGGGTCCTCCTCGCCCTGGTATGATGCCAGCACCCCATATGGGGGGCCCTCCCATGATGCCAATGATGGGCCCTCCTCCTCCTGGGATGATGCCAGTGGGACCTGCTCCTGGAATGAGGCCGCCCATGGGAGGCCATATGCCAATGATGCCTGGGCCCCCAATGATGAGACCTCCTGCCCGTCCCATGATGGTGCCCACTCGGCCCGGAATGACTCGACCAGACAGATAAGGATAGAGGGGAGGCCTTATTGTATCGGTTTTATATTACCTGTTCTGCTTCACCAGGAGATCATGCTGCTGTGATACTGAGTTTTCTAAACAGCATAAGGAAGACTTGCTCCCCTGTCCTATGAAAGAGAATAGTTTTGGAGGGGAGAAGTGGGACAAAAAAGATGCAGTTTTCCTTTGTATTGGGAAATGTGAAAATAAAATTGTCAACTCTTTCAGTTAAAAGTGTGTTCCCTTTTTCCTCCTCTCTGTGTTCTCTGTGTATTATAAAAGAAATGAAACATTCCA