Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name SNRPF
Plot displaying the genomic locations of a parental gene (in chr12) and its retrocopy(ies). Each line represents a retrocopy.
Specie Homo sapiens
Full Name small nuclear ribonucleoprotein polypeptide F
Also known as SMF|Sm-F|snRNP-F
Coordinate chr12:95858952-95867105
Strand +
Gene summary Enables RNA binding activity. Involved in spliceosomal snRNP assembly. Located in cytosol and nucleus. Part of several cellular components, including methylosome; nucleus; and pICln-Sm protein complex. Biomarker of nasopharynx carcinoma. [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from SNRPF

Retroname Coord Strand Genomic Region ENSG
SNRPFP5 chr1:204394534-204394848 + Intergenic
ENSG00000237848 UCSC
SNRPFP2 chr1:25887332-25887673 + Intragenic
ENSG00000229786 UCSC
SNRPFP6 chr15:72682279-72682905 - Intragenic
ENSG00000261281 UCSC
SNRPFP7 chr15:75512704-75513123 - Intragenic
ENSG00000259931 UCSC
SNRPFP1 chr20:49729589-49729843 - Intergenic
ENSG00000231878 UCSC
SNRPFP4 chr3:48161188-48161413 + Intragenic
ENSG00000235627 UCSC

Expression

Transcript Sequences

>NM_003095.4
CTGTTTGGCGGCCATTTCTCTTGAAACTGCGGCTCGGGACCTGCGGTACCTGCTGTAGTCACGAGGGACGGGCGGCGGCCTGGTCGGCAGAGAGTAGCCTGCAACATTCGGCCGTGGTTACGATGAGTTTACCCCTCAATCCCAAACCTTTCCTCAATGGACTAACAGGAAAGCCAGTGATGGTGAAACTTAAGTGGGGAATGGAGTACAAGGGCTATCTGGTATCTGTAGATGGCTACATGAACATGCAGCTTGCAAATACAGAAGAATACATAGATGGAGCTTTGTCTGGACATCTGGGTGAAGTTTTAATAAGGTGTAATAATGTCCTTTATATCAGAGGTGTGGAAGAAGAGGAAGAAGATGGGGAAATGAGAGAATAGCATCTTTTGTGGGGGATTTTTTTTATATATATTTCTAGACAATAAAGATTTGTTTGTTTTTCAACTTGACTTGTGAACTATTTGTATTCAGATATTTACAAGCAAAGCTGAAATGATGAACCAATTGGGAAAGATTACTCACTGAACTAATGCTTTAAAAGCCACTGAATTTCATTTAAGTTGCTTTTCTTTTGTAAGCCCAATATTCTTTTTTTTCCCATAAAGGATAATTATTTATATGCTTTAGATATTTTTATGAAGGTGAATTTCAGACCTTTTCTTGTAAAATTATCTATTAGCTGAGACCTTTTAAATGCAACTTTTTCTTTTAAAGTTATTTTTGAGCTACTTTTAACGTATAAAATTAAACATTTTCTTGGTATTAATAATATACTGTCTTATTTTACTTAGTAGTCAATAAATTACATGTTAATTCTGTGTCAATATAAGCTAAATGCACATATTGCAGCTAAAATTGAAGCATCTTCTAAAAATTAAAATGATTGTACAGACAGGGCACAACAGAAATTGGGAACTGACATTCAGGCTGAAGGCATACGGTTTGTTCACTGAAGAGAAAAAAGTTCTCTGAACAAAATGTAATGTCAAATAAAAACCAGTCTCCCCATTATGTTCTGAGACATAACCTCGAGGTTGAGTTTTAAGCCCCTCAAAACCCTTCAGGTATTTTAGGGTTGTACATTGTTAAAATGTATAGTCCATAGTAATAACAGTATGCTATGAACTTCCCTACAGATGGGTTGAGAAAATACATCATTTACATTCTCATGTTGTAAGAGAATGGCCATTATTACACTTCAGTGTTCATTTACCATAGTTTTATCAGTAAACTATCTTTGTGTATCCCCAAGTGGGACAACTCAAAGTATAGAAGAAAGTGTTTAGCTATATGGAATAATACTTATGATATGAATACTTAAAGACTTAAAATTTACAAAATACACCTAAGACATTCTGGTAATAAAATGTCTTACTGCTTTTATTCAAGTAAAAAAATATTCTTCCTCTTGTGA