Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl15
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L15
Also known as 2510008H07Rik
Coordinate chr14:4198710-4201873
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in A band; cytosolic ribosome; and nucleus. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in cerebellum external granule cell layer; liver; neural retina; olfactory epithelium; and pancreas. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 12. Orthologous to human RPL15 (ribosomal protein L15). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl15

Retroname Coord Strand Genomic Region ENSG
Rpl15P25 chr11:92660808-92661249 - Intergenic
ENSMUSG00000081363 UCSC
Rpl15P27 chr15:52340961-52341770 - Intergenic
ENSMUSG00000057262 UCSC
Rpl15P13 chr6:52820178-52820555 - Intragenic
ENSMUSG00000081872 UCSC
Rpl15P24 chr11:77638121-77638918 + Intergenic
ENSMUSG00000081924 UCSC
Rpl15P1 chr1:51979824-51980458 - Intergenic
ENSMUSG00000072324 UCSC
Rpl15P2 chr1:72126979-72127667 + Intergenic
ENSMUSG00000101496 UCSC
Rpl15P20 chr10:39628206-39628902 - Intragenic
ENSMUSG00000081608 UCSC
Rpl15P21 chr10:77488526-77489218 - Intergenic
ENSMUSG00000112007 UCSC
Rpl15P22 chr11:20524581-20525222 - Intragenic
ENSMUSG00000083555 UCSC
Rpl15P23 chr11:21903105-21903754 + Intergenic
ENSMUSG00000082874 UCSC
Rpl15P26 chr12:12073006-12073709 + Intergenic
ENSMUSG00000078377 UCSC
Rpl15P28 chr15:54849944-54850550 + Intergenic
ENSMUSG00000114990 UCSC
Rpl15P29 chr16:33827161-33827865 - Intragenic
ENSMUSG00000116835 UCSC
Rpl15P30 chr17:8602830-8603527 - Intragenic
ENSMUSG00000116704 UCSC
Rpl15P31 chr19:15920935-15921146 + Intergenic
ENSMUSG00000090147 UCSC
Rpl15P32 chr19:42148074-42149207 + Intergenic
ENSMUSG00000117856 UCSC
Rpl15P5 chr2:32296032-32296719 + Intergenic
ENSMUSG00000083004 UCSC
Rpl15P6 chr2:38667747-38667975 + Intragenic
ENSMUSG00000082508 UCSC
Rpl15P7 chr2:80433043-80433738 + Intergenic
ENSMUSG00000083284 UCSC
Rpl15P3 chr2:100166513-100166902 + Intergenic
ENSMUSG00000084209 UCSC
Rpl15P4 chr2:133041496-133042169 + Intergenic
ENSMUSG00000083689 UCSC
Rpl15P8 chr3:123554943-123555635 + Intergenic
ENSMUSG00000080842 UCSC
Rpl15P9 chr4:105435493-105437380 + Intergenic
ENSMUSG00000082061 UCSC
Rpl15P11 chr5:44101195-44101864 - Intergenic
ENSMUSG00000059565 UCSC
Rpl15P10 chr5:106128383-106129082 - Intergenic
ENSMUSG00000105129 UCSC
Rpl15P12 chr6:122675321-122676023 - Intergenic
ENSMUSG00000080932 UCSC
Rpl15P14 chr7:16872744-16873434 - Intergenic
ENSMUSG00000108694 UCSC
Rpl15P15 chr7:25300812-25302573 + Intergenic
ENSMUSG00000108304 UCSC
Rpl15P16 chr7:97243987-97244683 - Intragenic
ENSMUSG00000108442 UCSC
Rpl15P17 chr9:22096851-22097554 - Intergenic
ENSMUSG00000061167 UCSC
Rpl15P18 chr9:71968178-71968882 + Intragenic
ENSMUSG00000098915 UCSC
Rpl15P19 chr10:31791570-31791925 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001359897.1
tttcctctggcGGCAGCCATCAGGTAGGGCGGCGGggtggtgtttgtgtgtctatccgTCGCGAATCGCGCTAGTCTTCAGCCATCCGACCCCGGCGACCCTACGGCCTCGGAGTTTCTGCCTCGCACGAGCGCCTAGTGAGGATACGGGGTGGAGAGGGTGAGCCAAGATGGGTGCATACAAGTACATCCAGGAGCTATGGAGGAAGAAGCAGTCCGACGTGATGCGCTTTCTTCTGAGGGTCCGCTGTTGGCAATACCGCCAGCTCTCTGCGCTGCACAGGGCTCCCCGCCCCACCCGGCCTGATAAAGCTCGAAGACTGGGATACAAGGCTAAGCAAGgcTATGTCATTTACAGGATTCGTGTCCGCCGTGGTGGTCGTAAACGCCCAGTTCCTAAGGGTGCAACTTACGGCAAGCCTGTCCACCATGGTGTTAACCAGCTGAAATTTGCCCGAAGCCTTCAGTCTGTTGCTGAGGAGAGAGCTGGGCGCCATTGTGGGGCTTTGAGAGTCCTGAATTCCTACTGGGTTGGTGAAGATTCCACATATAAATTTTTTGAGGTTATCCTCATTGATCCGTTCCATAAAGCTATCAGAAGAAATCCTGACACCCAGTGGATCACCAAACCAGtccacaaacacagagaaatgcGTGGGCTGACATCTGCTGGCCGAAAGAGCCGTGGCCTTGGAAagggccacaagttccaccacacTATTGGTGGTTCCCGCCGTGCAGCCTGGAGAAGGCGCAATACTCTCCAGCTCCACCGTTACCGCTAATACACGTGATATTTGTAAAATTCATATCCAATAAACAATTTAGGACAGTCATTTCTGCTTAAAGGTGTTATTTGTTAAAACTAGTCTACAGATTGTCATGAGTGTTCTGTGAAAATGTAGAAGTTAAGTGCAATAATTGAAAACTGCAGGTGATGGCATATCTTGTTTCTGATGTACTTTGCATTATCTGCTTATGAGATTAAGTGTATATAGTGTTTGTGCCAAGTGGTGTTCTGTGTGTAAGACCCTGTAAGAGGTAAAAAGTCCTGAAACTGACCCTGGATGTGTTGGTGCATGAGATAGAATCTACAGCTTTACGATGGCATCTTTTGGTTCACTGAAGTGGCTGCTTGGGAGTTTGATGAGTACAAACTTTATAGAGTTGGATTTTGCTTAGAAATGTGTAGGAAGAGAGGGTTTCAAAACCTGTTTTGTGCATAGAAAAGTGAGATCAACTATAACCCACATTTTGAGAATTGAATCCAGTGTTATTTTCAGAAGACCAGGTAAATTTGTTGGAAGAGGTTTCACTTTCTGTTGGATCTAGAGTATGGATTTGGAGATGAAGGTTGAACATTGGATGTAGTAGGGCTTATTTAGGGCAGATTATTTCCATTAGATTTGTAAACTTGGTTGTGGTTGCAAGTTAATATCAACCAAGCAAATATAAGTTTGATTAAGCTTGCAGACATTAAGCTTTTCTAGCAGCTGGTGTGTGCAGAGGCAGATGGCTCTCTGGTTCCAGGACTACCTACAATATAGAGAAATTTTCTCTATTCCAGTCAATTCATCATGGGTAAGAATAGTCCATTTTGGTAGTGTTATTTCATCGTTTACAATCTACCTATGGGTAGTGGCTGGTAACTGCCTGGATGTTGACATTTCACAAAGGCCATACTTAACCacacttttatttctatttgtgcGATGCCTTGGAGTAGTTTCCCAAAGTGATTTTGAGTGTGGAAGAAATGGTATTGTCCCCGAACAGCTGGCTTGGTCTCAAAATCTAATTGATGCTTTTATTAAATTGGTTTTCCTTTGGAGATTTTAAAAGGATGATTTGATTTCCAGAAAATACTAGACTCAAAATCTTGATAGCTAAAATTCTTTTCTATTCAGCAAAACAAGTCACTGTATAGAGGTTGTTCAAATCAACTAAAGTAATAAATGTCTTAAACAAGTGGA
>NM_001359899.1
tttcctctggcGGCAGCCATCAGGTAGGGCGGCGGggtggtgtttgtgtgtctatccgTCGCGAATCGCGCTAGTCTTCAGCCATCCGACCCCGGCGACCCTACGGCCTCGGAGTTTCTGCCTCGCACGAGCGCCTAGTGAGCCAAGATGGGTGCATACAAGTACATCCAGGAGCTATGGAGGAAGAAGCAGTCCGACGTGATGCGCTTTCTTCTGAGGGTCCGCTGTTGGCAATACCGCCAGCTCTCTGCGCTGCACAGGGCTCCCCGCCCCACCCGGCCTGATAAAGCTCGAAGACTGGGATACAAGGCTAAGCAAGgcTATGTCATTTACAGGATTCGTGTCCGCCGTGGTGGTCGTAAACGCCCAGTTCCTAAGGGTGCAACTTACGGCAAGCCTGTCCACCATGGTGTTAACCAGCTGAAATTTGCCCGAAGCCTTCAGTCTGTTGCTGAGGAGAGAGCTGGGCGCCATTGTGGGGCTTTGAGAGTCCTGAATTCCTACTGGGTTGGTGAAGATTCCACATATAAATTTTTTGAGGTTATCCTCATTGATCCGTTCCATAAAGCTATCAGAAGAAATCCTGACACCCAGTGGATCACCAAACCAGtccacaaacacagagaaatgcGTGGGCTGACATCTGCTGGCCGAAAGAGCCGTGGCCTTGGAAagggccacaagttccaccacacTATTGGTGGTTCCCGCCGTGCAGCCTGGAGAAGGCGCAATACTCTCCAGCTCCACCGTTACCGCTAATACACGTGATATTTGTAAAATTCATATCCAATAAACAATTTAGGACAGTCATTTCTGCTTAAAGGTGTTATTTGTTAAAACTAGTCTACAGATTGTCATGAGTGTTCTGTGAAAATGTAGAAGTTAAGTGCAATAATTGAAAACTGCAGGTGATGGCATATCTTGTTTCTGATGTACTTTGCATTATCTGCTTATGAGATTAAGTGTATATAGTGTTTGTGCCAAGTGGTGTTCTGTGTGTAAGACCCTGTAAGAGGTAAAAAGTCCTGAAACTGACCCTGGATGTGTTGGTGCATGAGATAGAATCTACAGCTTTACGATGGCATCTTTTGGTTCACTGAAGTGGCTGCTTGGGAGTTTGATGAGTACAAACTTTATAGAGTTGGATTTTGCTTAGAAATGTGTAGGAAGAGAGGGTTTCAAAACCTGTTTTGTGCATAGAAAAGTGAGATCAACTATAACCCACATTTTGAGAATTGAATCCAGTGTTATTTTCAGAAGACCAGGTAAATTTGTTGGAAGAGGTTTCACTTTCTGTTGGATCTAGAGTATGGATTTGGAGATGAAGGTTGAACATTGGATGTAGTAGGGCTTATTTAGGGCAGATTATTTCCATTAGATTTGTAAACTTGGTTGTGGTTGCAAGTTAATATCAACCAAGCAAATATAAGTTTGATTAAGCTTGCAGACATTAAGCTTTTCTAGCAGCTGGTGTGTGCAGAGGCAGATGGCTCTCTGGTTCCAGGACTACCTACAATATAGAGAAATTTTCTCTATTCCAGTCAATTCATCATGGGTAAGAATAGTCCATTTTGGTAGTGTTATTTCATCGTTTACAATCTACCTATGGGTAGTGGCTGGTAACTGCCTGGATGTTGACATTTCACAAAGGCCATACTTAACCacacttttatttctatttgtgcGATGCCTTGGAGTAGTTTCCCAAAGTGATTTTGAGTGTGGAAGAAATGGTATTGTCCCCGAACAGCTGGCTTGGTCTCAAAATCTAATTGATGCTTTTATTAAATTGGTTTTCCTTTGGAGATTTTAAAAGGATGATTTGATTTCCAGAAAATACTAGACTCAAAATCTTGATAGCTAAAATTCTTTTCTATTCAGCAAAACAAGTCACTGTATAGAGGTTGTTCAAATCAACTAAAGTAATAAATGTCTTAAACAAGTGGA
>NM_025586.3
cttcctttcctctggcGGCAGCCATCAGGTGAGCCAAGATGGGTGCATACAAGTACATCCAGGAGCTATGGAGGAAGAAGCAGTCCGACGTGATGCGCTTTCTTCTGAGGGTCCGCTGTTGGCAATACCGCCAGCTCTCTGCGCTGCACAGGGCTCCCCGCCCCACCCGGCCTGATAAAGCTCGAAGACTGGGATACAAGGCTAAGCAAGgcTATGTCATTTACAGGATTCGTGTCCGCCGTGGTGGTCGTAAACGCCCAGTTCCTAAGGGTGCAACTTACGGCAAGCCTGTCCACCATGGTGTTAACCAGCTGAAATTTGCCCGAAGCCTTCAGTCTGTTGCTGAGGAGAGAGCTGGGCGCCATTGTGGGGCTTTGAGAGTCCTGAATTCCTACTGGGTTGGTGAAGATTCCACATATAAATTTTTTGAGGTTATCCTCATTGATCCGTTCCATAAAGCTATCAGAAGAAATCCTGACACCCAGTGGATCACCAAACCAGtccacaaacacagagaaatgcGTGGGCTGACATCTGCTGGCCGAAAGAGCCGTGGCCTTGGAAagggccacaagttccaccacacTATTGGTGGTTCCCGCCGTGCAGCCTGGAGAAGGCGCAATACTCTCCAGCTCCACCGTTACCGCTAATACACGTGATATTTGTAAAATTCATATCCAATAAACAATTTAGGACAGTCATTTCTGCTTAAAGGTGTTATTTGTTAAAACTAGTCTACAGATTGTCATGAGTGTTCTGTGAAAATGTAGAAGTTAAGTGCAATAATTGAAAACTGCAGGTGATGGCATATCTTGTTTCTGATGTACTTTGCATTATCTGCTTATGAGATTAAGTGTATATAGTGTTTGTGCCAAGTGGTGTTCTGTGTGTAAGACCCTGTAAGAGGTAAAAAGTCCTGAAACTGACCCTGGATGTGTTGGTGCATGAGATAGAATCTACAGCTTTACGATGGCATCTTTTGGTTCACTGAAGTGGCTGCTTGGGAGTTTGATGAGTACAAACTTTATAGAGTTGGATTTTGCTTAGAAATGTGTAGGAAGAGAGGGTTTCAAAACCTGTTTTGTGCATAGAAAAGTGAGATCAACTATAACCCACATTTTGAGAATTGAATCCAGTGTTATTTTCAGAAGACCAGGTAAATTTGTTGGAAGAGGTTTCACTTTCTGTTGGATCTAGAGTATGGATTTGGAGATGAAGGTTGAACATTGGATGTAGTAGGGCTTATTTAGGGCAGATTATTTCCATTAGATTTGTAAACTTGGTTGTGGTTGCAAGTTAATATCAACCAAGCAAATATAAGTTTGATTAAGCTTGCAGACATTAAGCTTTTCTAGCAGCTGGTGTGTGCAGAGGCAGATGGCTCTCTGGTTCCAGGACTACCTACAATATAGAGAAATTTTCTCTATTCCAGTCAATTCATCATGGGTAAGAATAGTCCATTTTGGTAGTGTTATTTCATCGTTTACAATCTACCTATGGGTAGTGGCTGGTAACTGCCTGGATGTTGACATTTCACAAAGGCCATACTTAACCacacttttatttctatttgtgcGATGCCTTGGAGTAGTTTCCCAAAGTGATTTTGAGTGTGGAAGAAATGGTATTGTCCCCGAACAGCTGGCTTGGTCTCAAAATCTAATTGATGCTTTTATTAAATTGGTTTTCCTTTGGAGATTTTAAAAGGATGATTTGATTTCCAGAAAATACTAGACTCAAAATCTTGATAGCTAAAATTCTTTTCTATTCAGCAAAACAAGTCACTGTATAGAGGTTGTTCAAATCAACTAAAGTAATAAATGTCTTAAACAAGTGGA