Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Polr2l
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name polymerase (RNA) II (DNA directed) polypeptide L
Also known as 2510029B14Rik
Coordinate chr7:141051773-141055066
Strand -
Gene summary Predicted to enable zinc ion binding activity. Predicted to contribute to DNA-directed 5'-3' RNA polymerase activity. Predicted to be involved in tRNA transcription by RNA polymerase III; transcription by RNA polymerase I; and transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and respiratory system. Orthologous to human POLR2L (RNA polymerase II, I and III subunit L). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Polr2l

Retroname Coord Strand Genomic Region ENSG
Polr2lP1 chr2:126551105-126551488 - Intragenic
 ENSMUSG00000074846 UCSC
Polr2lP2 chr4:117006098-117006489 + Intergenic
 ENSMUSG00000070834 UCSC
Polr2lP3 chr8:64386164-64386556 + Intragenic
 ENSMUSG00000109818 UCSC

Expression

Transcript Sequences

>NM_025593.1
ACTGCCGGCAGCCTGCACGCCAGACGCCGCCATGATCATCCCGGTGCGCTGCTTCACCTGCGGGAAGATCGTCGGCAACAAATGGGAAGCCTACCTGGGTCTGCTGCAGGCCGAGTACACGGAGGGGGATGCCCTGGACGCTCTGGGCCTAAAGCGCTACTGCTGCCGCCGCATGCTGCTAGCACACGTGGACCTGATTGAGAAGCTGCTGAACTATGCACCCCTAGAGAAGTGACCGCTGGAGCCtgccctcctctgtctcctgctggCCACGGGCAGCCTGTCGTGCTATGTTCAAACTGAGCTATTGGGGATGTTGGTGTATTGCCTGGCTGTGGCCCTGTGGCTAAGTCCTGTTACCCTGGAAGGAACTGTTTAGTAAAGATGTTTGCAGAACCACCAACAGGTCTAACTTCCAAGGTGCTCCATGTCCATGTCTGTGCTGTCTCTGAGGCTACCTGGCCTGCCTCCAGTCTTTCCCCTAGGGCTGGTCTCCTTCCCCTTCATCTGACTGGGAGTCTCGTCCTGTGGAGGAGTACCCTGCTTCCGTTCCCCGGGGCCTTGACCACTTTGATCAACGAGGTAGCCCTACAGTAGTCTTGTACCACATTGCTTTAGGGCCTCTCCGCTTCCTGCCTGTGTTCAGGATGGGCATAATGGATGTGGGCACCACACCATCCACAGGTATGGATGGGCCCAAGCCTGGTGACAATATTCCTTTGGAATGCTGAGCGTGCTTGGAGGTCCCAATCCTTGTGCTAGGGTTATTATGCATTTGGGTATTTGGTCTGCTTATAAGTCTTTGTATCACTGTgtccccacagaggccagatCCCCTGAGAGTAAAGTTATAGAATGTATAAGCTGCCATCAGgtattgggaatcaaacccagatttatttacctttcattttccaagacagggtttctctgtttggccttgactatcctggaattcaactctgcagaccaggctggccttgaactaaagagatcagtctctgcctcccgagtgttgagTTTAAAGGACGGCTTGTGCCACccaaccaaacccagatactgtagGAGTACGCCCAAGGCCACAGGCCTCACGAATTTCTTGGGTCCTAAAGCCCATCAGCTGTGTGAGCCTATCTGCTGCCCATGCCTGAGGATCTTGTTTCCAGAATCTTCCCAGGCCCGACAGCTAGGCAGCCCTGCCCCTTGACCCAATCCCCACAGCATGTAGTCCTAAGAAGCCTACTCTAGGCCAAAGGAGGTGGTGTAGTGCTTTAGCTCCTAGGCATCTGCATCAAGTACCCCGGGTTCTTTCTAGCACATTGATCCCTTTGAGaattttggtgggtttttttgttttgttttttgagaccagCTTTGGCTGGTTTGAAACTCACAACAGTCAGCCTGCCTTTACCTCTtggattctgggattaaaggtgtgtgtggcaTAGCatacccaccctaccccacccctggttttttgttgttttaaagaaaaaggcgggctggtgagatggctcagtgggtaagagcacccaactgctcttccaaaggtccagagttcaaatcccagcaaccacatggtggctcacaaccatccgcaacaagatcctcttctggagtgtctgaagacagcaacagtgtacttacatatattaataaataaatctt