Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ppdpf
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name pancreatic progenitor cell differentiation and proliferation factor
Also known as 0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik
Coordinate chr2:180829040-180830297
Strand +
Gene summary Predicted to be involved in cell differentiation. Is expressed in several structures, including esophagus; forelimb bud; and male reproductive gland or organ. Used to study non-alcoholic fatty liver disease. Orthologous to human PPDPF (pancreatic progenitor cell differentiation and proliferation factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ppdpf

Retroname Coord Strand Genomic Region ENSG
PpdpfP2 chr14:99624825-99625417 + Intergenic
 ENSMUSG00000115590 UCSC
PpdpfP3 chrX:48749714-48750380 + Intergenic
 ENSMUSG00000082192 UCSC
PpdpfP1 chr10:77267579-77268124 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001356427.1
GCTGTGAAGCGGGAGGGGCTTTGACGCGCGCCCCGCCTCCCAGTGGTGCGTCTTTTGCGGTGCAGGAAAGCTACTAAGTACGCGCGTGCGCATAGCGCGCGTGGGTCCTAAAGTGGTGTTTCGTGGGTTATCTTTGCAAATGGGCTCCGCGGCCTAGCGCCCTGGTGGCCTAAAAACGAAGCCTGCAAGGAAGGGGTTCTCCGCCGAGCGCCTCGGTCCTGAAGCATGGCAGCCATCCCTTCCAGCGGCTCGCTCGTGGCTACCCATGACTACTATCGGCGACGCCTGGGCTCCTCGTCCAGCAGCAGCTCCGGCGGAAGTGCCGAGTACCCTGGGGACGCCGTGCTCCAGTCCCCGGGTCTTCCCAAAGCCGACCCGGGCCACTGGTGGGCCAGCTTCTTTTTCGGGAAATCCACACTCCCGTTCATGACTACAGTGTTGGAGTCTCCTGAGCGCTCGGCAGAATCCCCCCAGGTCTCCAGAAGCCCGATGACCTGTGGCCTGACTCCTGAAACCATGAAGCAGCAGCCAGTCATCCATTCTGGCCAGACCAACCCCAGGGACCTTTCCTGACCTATCAGAATCTGCAGCCTGCCCAAGCTGAAGTGGTGCTAGGCCAGTGCCTACCCTCTCGACCCTCCCTGTAAACTAGGAAGGCTGAACAAGAGAAACCAGTAGAAGCTGGAGAGAGCCCCCTCTTGGTTCACAGCACTGAACTTTCCTGACCCCATAACTGTGTCTTGgcacaaagcagaaaataaactCACAGCAGCCACCC
>NM_025598.3
GCTGTGAAGCGGGAGGGGCTTTGACGCGCGCCCCGCCTCCCAGTGGTGCGTCTTTTGCGGTGCAGGAAAGCTACTAAGTACGCGCGTGCGCATAGCGCGCGTGGGTCCTAAAGTGGTGTTTCGTGGGTTATCTTTGCAAATGGGCTCCGCGGCCTAGCGCCCTGGTGGCCTAAAAACGAAGCCTGCAAGGAAGGGGTTCTCCGCCGAGCCGGACCGGGCTGGTTGGAGCCGCTTGGAAACCTGGCACTGTCAGGACCCGGGAGACTCGGGGAACCCTCCGGTGTGCGGTGACCAGGGCCCACATTCTGCTCTCGTCTCCGCAGCGCCTCGGTCCTGAAGCATGGCAGCCATCCCTTCCAGCGGCTCGCTCGTGGCTACCCATGACTACTATCGGCGACGCCTGGGCTCCTCGTCCAGCAGCAGCTCCGGCGGAAGTGCCGAGTACCCTGGGGACGCCGTGCTCCAGTCCCCGGGTCTTCCCAAAGCCGACCCGGGCCACTGGTGGGCCAGCTTCTTTTTCGGGAAATCCACACTCCCGTTCATGACTACAGTGTTGGAGTCTCCTGAGCGCTCGGCAGAATCCCCCCAGGTCTCCAGAAGCCCGATGACCTGTGGCCTGACTCCTGAAACCATGAAGCAGCAGCCAGTCATCCATTCTGGCCAGACCAACCCCAGGGACCTTTCCTGACCTATCAGAATCTGCAGCCTGCCCAAGCTGAAGTGGTGCTAGGCCAGTGCCTACCCTCTCGACCCTCCCTGTAAACTAGGAAGGCTGAACAAGAGAAACCAGTAGAAGCTGGAGAGAGCCCCCTCTTGGTTCACAGCACTGAACTTTCCTGACCCCATAACTGTGTCTTGgcacaaagcagaaaataaactCACAGCAGCCACCC