Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Gtf3a
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name general transcription factor III A
Also known as 2010015D03Rik|2610111I01Rik|5330403M05Rik
Coordinate chr5:146885467-146892424
Strand +
Gene summary The product of this gene is a zinc finger protein with nine Cis[2]-His[2] zinc finger domains. It functions as an RNA polymerase III transcription factor to induce transcription of the 5S rRNA genes. The protein binds to a 50 bp internal promoter in the 5S genes called the internal control region (ICR), and nucleates formation of a stable preinitiation complex. This complex recruits the TFIIIC and TFIIIB transcription factors and RNA polymerase III to form the complete transcription complex. The protein is thought to be translated using a non-AUG translation initiation site in mammals based on sequence analysis, protein homology, and the size of the purified protein. [provided by RefSeq, Jul 2008]

Retrocopy(s) from Gtf3a

Retroname Coord Strand Genomic Region ENSG
Gtf3aP1 chr17:59109968-59110623 - Intergenic
 ENSMUSG00000117298 UCSC

Expression

Transcript Sequences

>NM_025652.3
CCTGGAGCCTTAGCGGGCCGCGTTCCCGGAAGTTCAAAGTCTCCGGGCGCCAGTGGCTTGCGTCCCGCGTTCCCGGGGACGGCACGTGGCTGCCCCGCGTCAGCCCGGGCCCGATCGTGTCGCCCTGGAGCCGCGGGTGTCAGTCGCGGAAGCGGTGTCGTCGCTGACCATCGCGGATGCGTTCGTCGGGGCCTGTGAGGGCCCCGCGCCGCCGCGCCCCGCGCTGCCCAGCAGGTTCATCTGCTCCTTTCCCGACTGCAGCGCCAGTTACAACAAAGCCTGGAAGCTAGACGCGCACCTATGCAAACACACGGGGGAGAGGCCATTTGTTTGCGACTATGAGGGCTGTGGCAAGGCCTTCATCAGAGACTACCATCTGAGCCGGCATGTCCTGATTCACACCGGGGAAAAGCCGTTTGTTTGTGCAGATGATGGCTGTAATCAGAAATTCAACACAAAATCAAACTTGAAGAAACACATTGAACGCAAACATGGAAACCCACAAAAACAGTATGTGtgcaGTTATGAGGGTTGCAAGAAGGCCTTTAAGAAGCACCAGCAGCTGAGAACCCATCAGTGCCAGCACACCAGCGAGCCGCTCTTCAGGTGTACCCACGAGGGATGCGGGAAGCACTTTGCCTCGCCCAGCAGGCTGAAACGGCATGGGAAAGTTCACGAGGGCTACCTGTGTCAAAAGGGATGTTCTTTCATGGGAAAAACGTGGACAGAGCTCCTGAAACACATGAGAGAAGCCCATAAAGAGGACATAACCTGCAATGTATGTCAGAGGATGTTCAAGCGCAGAGATTACCTTAAGCAGCACATGAAGACTCACGCCCCGGAAAGGGATGTGTACCGCTGTCCGCGGCAAGGCTGCGGAAGAACCTACACAACCGTGTTCAACCTGCAGAGccacattctctccttccacgaGGAAAAGCGCCCATTTGTGTGTGAGCACGCTGGCTGTGGCAAGACATTCGCAATGAAACAGAGTCTCATGAGGCACAGTGTCGTGCACGATCCCGACAAGAAGAGGATGAAGCTCAAAGTAAGAGCCCCTCGGGAGAGACGCAGCTTGGCCTCTCGCCTCAGTGGGTACTTCCCTCCTAAGAGGAAACAAGAGCCCGACTACTCCTTGCCTAACGCCAGCGCAGAGTCCAGCAGCAGCCCAGAGGCCCAGCTGCCCCCGCCAGCCGCCTTACTCACTGTCTGCTAGGCGGGAAGACTTCAGGGCGGCCAGCAGAGGCTCCTGGCCTGCACTTTTCCtattaaagtcactgacacacaacATCCGA