Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atg4b
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name autophagy related 4B, cysteine peptidase
Also known as 2510009N07Rik|Apg4b|Atg4bl|Autl1|MmAPG4B
Coordinate chr1:93682627-93717328
Strand +
Gene summary Enables peptidase activity. Involved in autophagosome assembly and cellular response to starvation. Located in cytoplasm. Is expressed in central nervous system; genitourinary system; gut; lymph node; and sensory organ. Orthologous to human ATG4B (autophagy related 4B cysteine peptidase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atg4b

Retroname Coord Strand Genomic Region ENSG
Atg4bP1 chr9:123696482-123698078 - Intragenic
ENSMUSG00000111148 UCSC

Expression

Transcript Sequences

>NM_174874.4
GCGTGCCCACCGCCGTACGGCGAGATGGCGACGCCCGCGCTTCCGCTGCGCCGCGCTTGGCTGCCGCGGCTTCCCGTCGCCGTGTCGCGCAGTAGTCCGTCGGAGCGACGGCACGGTCAGTCGGCAGCCGGACAGGGAAGATGGACGCAGCCACTTTGACATATGATACTCTCCGGTTTGCTGAATTTGAAGATTTCCCTGAGACCTCAGAGCCTGTTTGGATTCTGGGcagaaaatacagcattttcacaGaGAAGGACGAAATCTTGTCTGATGTTGCATCCAGACTTTGGTTTACATACAGGAGAAACTTTCCAGCTATTGGGGGAACTGGCCCTACTtcagacacaggctggggttgCATGCTTCGGTGTGGACAGATGATCTTTGCCCAGGCCCTGGTATGCCGGCACTTAGGTCGAGATTGGAGGTGGACTCAGCGGAAGAGGCAGCCTGACAGCTACTTTAATGTCCTCAATGCTTTCCTCGACAGGAAGGACAGCTACTATTCCATCCATCAGATAGCGCAAATGGGAGTTGGCGAAGGCAAGTCTATAGGCCAGTGGTACGGGCCGAACACTGTTGCCCAGGTCCTCAAGAAACTTGCTGTATTCGACACATGGAGTTCCTTGGCTGTTCACATAGCAATGGACAACACTGTGGTGATGGAGGAAATCAGAAGGTTATGCAGGGCCAACCTTCCCTGTGTTGGGGCGGCTGCACTTCCTACTGATTCAGAGAGGCACTGTAATGGGTTCCCTGCTGGAGCTGAAGTCACCAACAGGCCATCGGCTTGGAGACCACTagtgcttctcatccctctccgcCTGGGACTGACAGACATCAATGAGGCCTATGTGGAGACGCTGAAGCACTGTTTCATGATGCCCCAGTCCCTGGGTGTTATTGGAGGGAAGCCCAACAGTGCCCACTACTTTATTGGCTATGTTGGGGAGGAGCTCATCTATCTGGACCCCCACACTACACAGCCTGCAGTGGAGCTGACTGACAGCTGCTTCATCCCCGACGAGAGCTTCCACTGCCAGCACCCTCCCTCTAGGATGGGCATTGGAGAGCTTGACCCGTCCATTGCTGTGGGGTTTTTCTGTAAGACGGAGGAAGACTTTAACGACTGGTGTCAGCAAGTCAAAAAGCTATCCCAGCTTGGAGGTGCCCTGCCCATGTTTGAGCTGGTGGAACAGCAGCCTTCCCATCTGGCCTGCCAGGATGTCCTGAACCTGTCCCTAGACTCTTCTGATGTAGAGAGACTGGAGAGGTTTTTTGACTCTGAGGATGAAGACTTTGAAATCTTATCCCTCTGAAAATCCTGGGGTTGGGGGATGGCCTCCATGGCCCTCATTGGGGTGCTTTGAGAACCCAGACCTGCCTTGGGCACTCAGTGTCACCGCATTCCATCCACCCAGCCCATCCCTGCCAAGTGCTGTTCACCTGTGCCACCTCTGTCCCGAGGGCCTGCTCTGCTCATGGACCAAGGACTATGGTGCCTGGAGGCCTTAATGCTTGGAGTCAGACTGCCTAAACCCCAACACAAAGGGCCTGTCCACATGAAGTCGCTCATCAGAAGGCCTAGTCAGGAAGAGCAGTGGGTCAGGAGCTTCCAGAATTCTCCACTGGATTCTGACACTGCCAGCCCTGGTCAGCACATCAGCTTTGgttctgctttctcctgggcaCCTGGGTCTGTGGTTTATTTGGAATTAAAGCCCTGTTTGAAGTTGTTTAACAAAGACATGAATTTCTGGGGCACTTCCCAGGTCAGTCTTAGACGATCTGCAGGTTATGTACAGAGTGACAGCCACATCATGGCCTCATACTGCTGGGCGGGGTGAGCTTTGGGCTGTCTCCTCTGCCCAGTGTGATTTATCAAGGGCTACCTCAGTGGGAAAGCATATGGAGAGAATCCCAAGGCTGCTACTTGCTTTGGAGAGAAAGTATTCTTGTGGGGCATTTGGAAAATCCAAAGATATCAGTGTGCATGGGCACAGGATGGACCCCTGAACCCTGGAGCAACTGACAAGCTCCTAGGGCTTCTGGAGTTGTGGTCCTGGGATTCCCCATTAGGACCTCGCTAGGGAAGAGAGAGGTTTCCTCTGTGGGGTTGATGCGTTTCATGACACACCGCCTGCTGCTTTTAGCGTGCCACCCAGCTTCCctctgggaggaaagggaagggagcagAGCTGCTCTATGCTTGAGACACCGTGCCCACTGGTGGTAGGGTACACACTGCTACTTGAGCCTTCCtccatgttctttctcttctcagaAACCCATCTGGGTCACAGGAAATTGTAGATGGTTTGGGGCCAAAAAGGTAAAAGTACTACAGCTTTTTGGTGCACAATAGACATTTAGACAGCAGGTAGCTCCAGGCACTCACAAGTGAAGAGTTCAGACCTCCTTGGCACTCATTTCCATACCTGCCACCTAACCCTGGCTTTCTGGGCCTTCAAGCTTTTGATGCTCTAGGTCTGCTGTCTTAGAAAAACACCTTTCCTCCCCCTAGATATGAGCAGAGTATGGCAGTGTGGGGAGGACCGTTCAAGAGCCTTTGCTAAAAGCCCTTCCCAAGAACTCGCAGATGGGTGAGGCCAGAGCTACTCCAGATGCAGCAGCTCTAAGTAGCCCACAAGGTAGCAAGAGATCCCTGCCTATCAAGTGTTGAAGacatatttatttcatcttactctTTCTCTCCCATATCTTGTCCCTTGACTTCAGATGGGgtgggacgggggggggggaaaggcCAGGACAGTTTCCATTCCCCCGGAGCTTGTTTCCTGAGGCCAGGAGCTATTGTGCTGCTGTCGCCCAGGGTCTCGCTGTAACTCCTGTTGTTGGTAGTAAGGGGTGGACATATGGAACACTACAACCTGAGGGAACTCTCAGGGCTTGAGAAAGGCTTCCTGAGGTTGTTCATTCTTAGTGTAGTTTGCAATTCTTAATGATAAATAAGTTTCAGTAGAAAAcaaagtcttgtgtgtgtgtgttgattttttttcccctccagttATGATTAGCTTTGATTTTAGTGTTAACAAGTAAAGACTTCCTGAAGTTGGACAAGCAGATCCTGCCCTGTTCCTggccttgctgtgtagccaatgTCTGTTTTCCCTCATATTAAACTCATggtcctaaaaaa