Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Lix1
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name limb and CNS expressed 1
Also known as 5730466L18Rik
Coordinate chr17:17622948-17679649
Strand +
Gene summary Predicted to be involved in autophagosome maturation. Predicted to be active in cytoplasm. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; lateral plate mesoderm; and sensory organ. Orthologous to human LIX1 (limb and CNS expressed 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lix1

Retroname Coord Strand Genomic Region ENSG
Lix1P1 chr1:60630491-60631869 - Intergenic
 ENSMUSG00000082160 UCSC

Expression

Transcript Sequences

>NM_025681.2
GTGTTTAACAGAACGAAGCCATGGGAACCAGCCTGTCAGCCAGCCTTTCAGGCTAATTAGCTCAGCATACAACAAAGATAAGTGAGCCTGAGAGGAGGGCCCTGAGGGTCTTTAGATTCTGGGAAATGTCTGATTGGCAGATGTTAAAAGGGATTCTTTAGTAATCCACTGCATCAATGAGCTGCACAAATTCAGTCCAGAGCTGCAAGAATTCAGGCATGAGGAGACTGTGCAGGAGGCTTGCACAGGCAGACTCGAGATGGACAGAACCTTGGAATCTCTGAGGCACATCATTGCCCAAGCCTTGCCTCACAGAGACCCGGCTTTGGTCTTCAAAGACTTGAATGTTGTGTCAATGTTACAGGAATTTTGGGAAAGCAAGCAGCAGCAGAAAGCCACCTTCTCCAGTGAGGGACTGGTGGTCTATGAGTCAATGCCTTCCTCTGGGCCTCCCTTTGTGAGCTATGTGACTCTCCCTGGAGGGAGCTGCTTTGGCAACTTTCAGTGCTGCTTAAGTAGAGCTGAGGCCAGGCGGGATGCTGCTAAAGTGGCGCTCATCAACTCTCTCTTCAATGAGCTACCCTCCCGAAGGATCACCAAGGAGTTCATCATGGAGAGTGTTCAGGAAGCAGTAGCCTCCACCAGGgGCACGTTAGATGATGCGGATGACCCAAGCACAAGTGTGGGAGCCTATCACTACATGCTGGAGTCAAACATGGGGAAGACTATGCTGGAGTTTCAGGAACTAATGACCATTTTCCAACTACTGCACTGGAATGGAAGCCTGAAAGCCCTCCGTGAAACAAAGTGCTCTCGACAGGAAGTCATCTCCTACTATTCCCAATATTCTTTAGATGAAAAGATGCGTAGCCACATGGCCCTGGACTGGATTATGAAGGAGCGTGAATCACCAGGAATTCTCTCTCAAGAGCTGCGTGCAGCCCTAGGGCAGCTGGAGGAAGCCAGGAAGGCTGGACAAGAACTAcgattttacaaagaaaaaaaagaaatcctgagcTTGGCCCTGACTCAGATCTATAGTGACCCTGACCCTTCCTCACCCAGTGATGACCAGCTAAGCCTCACGGCTCTGTGTGGCTATCATTAGCAAGGCCAGGTGGCAGGTTTCCTGAGGACGTTCACATCAGGAATCTACCTGACAGAAGTTGTTAGAGATTTTAGCATGATAGTCAGTACCTGAAGGCTGTACTGCTCCTACACAGTCTGTTCACAGAATGGGAGGCTAGGGTTGACTGATCCCGATCCCAACTTCCTACTTCATGTATGTTTTCAACCATTCCCTTAGGGATTCTACttcagaataaaaagaaagacaacaaaATTACTTTAGAAAGCATTCTTCAGGGTTTGATCTAATCTAAAAAACCTAGTTGATATGTGCCTTGCTAAATTGTATGCATTGCTTCACACAACAGTCCAGTAGAGCAGTCTTGGAGAAAACAGCAGCCAGGACTAGGGAAAGGATCAtgataacttctttttttctttttttttgggggggcacagtttctctgtgtagccctggctgtcctggaacttgtctttagatcaggctggccttgaactcagagctctgcttctgagtactaggattaactACATCTACCACAACCACCTGGCCTATAACAATGTTTTAAATACTTAAGAGTAAATAAATAGTacagatgatttaaaaaaaatgtacaacaCTCAGCATGTTTTGAACCCTCCTGAAAATTACTGTATCctcattatatattttgaaattagctTTAATAACAAACACTATCACATATACTTCTCAGACAGGATGAAATTAAGTACATAACTGCCCTATTCCAATGTCCTAAAAAGGTGATGGTGTGTAGTGTTAgatgatttcattttaaaatgatatttttttaaaaatcatatcactTCCCATAATGAGGCTAAAtgttctaaggaaaaaaaaactttagattTTTGTAATCTTGAGAAGGAgttaggatttgtgtgtgtgttgaataaatttttaagtgaagaaatttctatttcatttttttttttacaaacttttTATCATTTCAAATTCAGCACATTTCCCCATGTTGGCTGGGATCTTTACGTGCAGTGCATGTTTACTGTGTTTGGCAATGTCCACCTCAGAAGATTGATATCTGATTAGATGCAAGAACAGTGCTTGCGTGGGTCAAGCTTCTCCTCTCTTTTATAATTATGACACTGTACAAATTCTCTGAACTGAAAATTACGTAGACTATTTTTCCTTGGAATATTCTCAGAAACTTCAGCAAAAGCAACAAAGGTTATGGCCATGGCTGGCCCTATCTAATAGCAAATCAACTTCAGCCAGGGCATTGTGCCAACCGAGTATCACACATGTCTGTAACACTGGCACAGAGGAACCTAAGAGAGGGACAAGACAAACACGCACGCTTGTTCTTAACACTGCACTGTAGAAAGGGACAAGAATAAAGGAGTCTCTAAGAAGATGGAGCCATGAAGGTGGTGCTTGTTGTTGCTATGAACTCCCTGAAAATTGAATAAAAAGCCACAGACTATCTCATAGCAAtatataataatttcataaaacatATGGCCCTGCCCCAAAATTTATGGATTAGCCCAGAGCATCATTGACCCTTAGTTTGAAGCTCACAATTTTAAAAGCATACATAGTTTTACACTTCATATGAGAGATCTAGTAACCCATAgaccatatatttttttcttttcttttctttctttttttttttttttccgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtagaccagactggcctcgaactcagaaatctgcctgcctctgcctcccaagtgctgggattaaaggcgtgcgccaccactgcctggccatagACCATATTTTTAAGATTACTACCATTACTCTGAAATCAAGAATTGTATTGTTTGGGGCATGAtggtttaatttttataaaaatcaaaatgcacCTTGTTGttatggagaaagaaattaagacaaaCTAGACACTAAACTTTGGCAACTGTACCAGAACATTACAGATTTAATAAAATCATTGTTCCTTCAATATTCTGAA