Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atg4a
Plot displaying the genomic locations of a parental gene (in chrX) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name autophagy related 4A, cysteine peptidase
Also known as Apg4a|Atg4al|Autl2
Coordinate chrX:139854594-139947190
Strand +
Gene summary Predicted to enable cysteine-type peptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in embryo. Orthologous to human ATG4A (autophagy related 4A cysteine peptidase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atg4a

Retroname Coord Strand Genomic Region ENSG
Atg4aP1 chr3:103551268-103553384 - Intragenic
Intragenic
ENSMUSG00000087119 UCSC

Expression

Transcript Sequences

>NM_174875.5
AGAGAAAGCCGTAGTCAAGTTGCCGGTGGAATTGGCCCAGGATGACAGCTGGAGAATGGAGTCAGttATGTCCAAGTATGAAAACCAGATTCTTATTTTCCCTGACTACCTGGAAGAATTCCCGGATACAGATGAGCTGGTATGGATTCTGGGGAAGCAGCACCCCCTTAAGACAGAAAAATCTAAGCTGTTGTCTGATATAAGTGCTCGTCTATGGTTTACATACAGAAGGAAGTTTTCCCCGATTGGGGGAACAGGCCCTTCATCTGATGCTGGATGGGGATGTATGCTGCGCTGTGGGCAGATGATGCTGGCTCAAGCCCTCATCTGCAGACACTTGGGAAGGGATTGGAACTGGGAGAGACAAAAAGAACAACCCAAAGAATACCAAAGGATACTGCAGTGTTTCCTAGATAGAAAAGACTGTTGCTATTCAATCCATCAGATGGCACAAATGGGTGTAGGAGAAGGGAAATCAATTGGCGAATGGTTTGGACCAAACACAGTTGCACAGGTGATAAAAAAACTCGCTTTATTTGATGAATGGAATTCCTTGGCTGTTTATGTTTCCATGGATAACACAGTGGTCATTGAAGATATCAAGAAAatgtgctgtgttcttcctgtgggTGCTGCTGACCCAGCTGGTGATTTTCTGACTGCATCCAATCAGAGTAGAGACACCTCTGTCCCGTGCTCAGCCTGGAAACCCCTGCTGCTCATTGTGCCCCTTCGCCTGGGCATAAACCAAATCAATCCTGTGTATGTTGAAGCATTCAAAGAGTGTTTTAAGATGCCACAGTCTTTAGGGGCTTTAGGAGGAAAGCCAAATAACGCCTATTATTTCATAGGATTCTTAGGAGATGAGCTCATTTTTTTGGACCCTCACACAACCCAGACTTTTGTTGACATTGAAGAGAGTGGACTAGTAGACGACCAGACTTTTCATTGCCTGCAGTCTCCACAGCGGATGAGTATCCTGAACTTGGATCCTTCTGTGGCCTTGGGATTTTTCtgcaaagaagagaaagactttGATAATTGGTGTAGCCTTGTTCAGAAGGAAATTCTAAAGGAGAATTTGAGGATGTTTGAATTGGTTCAGAAGCACCCATCACACTGGCCTCCCTTTGTACCTCCAGCCAAGCCAGAAGTGACAACCACAGGGGCAGAATTCATAGAGTCGACTGAACAACTGGAGGACTTTGAGCTGGAGGAAGATTTTGAAATTCTGAGTGTAGGCTAGTTAGAACTCAGTGAGGTGGTCTTCTGCCTTCCATCGGGCATCACAAGCACATGAAAACTTTTCTGGTCAGCAAGTGCCTGATATGCAGATAGCATACAAACTCAATAACAATGATGACTGAGCCAGTTGTCCCTTGttcagaagcaaaacaaaaacagcaaatcaATGGCACCGAGTCACCCTGGAAAGACAGAAAACTATGGAGTCTAGGAGAAGATTGAGAATCCATTGCTCCCCAGCTCGTCTTACATGGCGACAGCAAGTCTTCAGCAATGGAAACGAGGGCATTTGGAAAGCAGACAGCATCTTCCATCTTGCTGCAACTATGGGCAGATGAGAGATGGTTATACTATACTACTCCACCCTTTCAGGTGGGGCTAAATACTAAGAATAAATCTGTTTTCTtgttcaaataataaaataaatgaatcaggGAGAAATACTCTTGTTAAATTATCTGAATATGCAGTTTACATAATTGTaatttttatcaaaatatttGTCAAAATGATGTCAAATATACACTTCTTAGTTGTCTTCCTTTTGGAGAAACCTGTTTGATAGGTCACAATCTCCATCCTTACTGATGCTTTCATTAGATGTCACCGTATCCTTCAATCCAACCATGATCACTTGAAGCAGAGATCAGCAAACTTTTTctgtaaagataatattttagtcTTTGTAGGCTGGGTGGCCTTTGTTGTAACTAttctcctctgtaaaagcagtccCAGACAATATGCATGTGACCGAGCATGGCTGTACTCTAATAAAATTTGATGTACAAAAGCAAGAGGAAGGCTGGACTGGCCTTACCAATCGCTCACTTAAAGCATTGATTTTTGTTTGAAGGTTTAAATAAATTGTTTGAATTATA