Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Eef1d
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Also known as EF-1-delta
Coordinate chr15:75766645-75781430
Strand -
Gene summary Predicted to enable several functions, including DNA-binding transcription factor binding activity; guanyl-nucleotide exchange factor activity; and heat shock protein binding activity. Predicted to be involved in cellular macromolecule biosynthetic process; cellular response to ionizing radiation; and regulation of cell death. Predicted to act upstream of or within translation. Located in cytoplasm and nucleus. Is active in glutamatergic synapse. Orthologous to human EEF1D (eukaryotic translation elongation factor 1 delta). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Eef1d

Retroname Coord Strand Genomic Region ENSG
Eef1dP1 chr4:115509837-115510738 + Intergenic
 ENSMUSG00000082043 UCSC
Eef1dP2 chr11:111166858-111167820 + Intergenic
 ENSMUSG00000082272 UCSC

Expression

Transcript Sequences

>NM_001285429.1
CGGATCCACTCTTCGAGCTGAGGAGGGGTTCGGCGTGTTGGGAGATCCGGTTCTCCGCTCCTAGCGACAACTCTTGAGGTGAAGCGCGGCTCTCAAGCAGAAAAATGGCTACAAACTTTCTAGCGCATGAGAAGATCTGGTTTGACAAGTTTAAATATGATGATGCAGAAAGGAGATTCTATGAGCAGATGAACGGGCCTGTGACCTCCGGCTCCCGCCAGGAGAATGGTGCCAGCGTGATCCTCCGAGACattgcaagagccagagagaaCATCCAGAAATCCTTGGCTGGAAGCTCaggccctggagcctccagtgGACCTGGTGGAGACCACAGTGAGCTCATTGTGAGGATTACCAGTCTGGAAGTGGAGAACCAGAACCTTCGAGGCGTGGTGCAAGATTTGCAGCAGGCCATTTCCAAGTTGGAGGCCCGGCTGAGCTCTCTAGAGAAGAGTTCACCTACTCCCCGAGCCACGGCCCCACAGACCCAACATGTCTCTCCTATGCGTCAAGTGGAGCCCCCAACCAAGAAAGGAGCCACACCAGCAGAGGACGATGAGGACAAGGACATTGACCTGTTCGGCAGTGACGAGGAGGAAGAAGATAAGGAGGCTGCCCGACTACGGGAGGAGAGGCTACGCCAGTACGCAGAGAAGAAGGCCAAGAAGCCCACACTGGTGGCCAAATCCTCCATCCTTTTGGATGTTAAACCTTGGGATGATGAGACTGACATGGCCCAGCTAGAGACTTGTGTGCGTTCCATCCAATTGGACGGGCTGGTTTGGGGGGCCTCCAAGCTTGTGCCTGTTGGCTATGGCATCCGGAAGCTGCAGATCCAGTGTGTGGTGGAGGATGACAAAGTGGGCACCGACTTGCTCGAGGAGGAGATCACCAAATTTGAGGAGCATGTGCAGAGTGTCGACATCGCAGCTTTCAACAAGATCTGAATGTCCGAGAGAGTGTGGTTTCATGTGTGTGAGGacctgctgagattaaagactgaGACTCTGCACTCCGCCTCTTGTGTTACTTGGTGTACAGCGCTCTGTGGGCTCTGGCTCATACTTGTCCCAGAAACAATCTATTAGGTCCACATTTGTCCACCGTGTCTCTCCTGTCCCTGCTGTTGTCACCGTGTACACCTAGACCCAGTCTAACACTCCTCTTCACACTCCTTACCTCTGGAGGGATACAtcctctttatatattctgggaTGGTTAGAATATGGACAGCCAGCTGTACTGTATGGAATTTTGTCTGCCCGCTCCCCTAAAACCCCTTGTCAGTGCTTGGGTATTGGTGGTATTGGGACGATAGTGCTCGTGAAATCCTGCGAACATCTAAGTTGAGAAAGTGTACCAAGTGTGGCTGATTCCTGTCAGTGTTGTTCATCATGGCCCCTAGTCACCAGGAAACAATGTAGCCCTCCCCCTCAAAAGTTTTAGACTTTTCCTGTGGGACCTGAACAAAAAACTGTCACCTGGGCAAGGATGACTTCGCAGTTAAGAACACTATTCTGGAAGATGGGgctcattcccagcaaccacatggaaacTTACaaaccagctgtaactccagttcctggatacctgataccctcttctggcctctgggcatgCATATCTGCCTGCAGTACAAAAAcacctacactttttttttttttttgagaataaaTTTTGCTGTATATCCTTGTCAGTttagag
>NM_023240.3
TGCCGCTGCGTTTTCCGGGAGCTGCGCGGGCGCCCTCCCTCTCCTTTGCAGTCCTGAGCTCGCAGTTCCAGGTTTTGGTTGCTGCGTCCTTGGCTGGCGTCAGAAAAATGGCTACAAACTTTCTAGCGCATGAGAAGATCTGGTTTGACAAGTTTAAATATGATGATGCAGAAAGGAGATTCTATGAGCAGATGAACGGGCCTGTGACCTCCGGCTCCCGCCAGGAGAATGGTGCCAGCGTGATCCTCCGAGACattgcaagagccagagagaaCATCCAGAAATCCTTGGCTGGAAGCTCaggccctggagcctccagtgGACCTGGTGGAGACCACAGTGAGCTCATTGTGAGGATTACCAGTCTGGAAGTGGAGAACCAGAACCTTCGAGGCGTGGTGCAAGATTTGCAGCAGGCCATTTCCAAGTTGGAGGCCCGGCTGAGCTCTCTAGAGAAGAGTTCACCTACTCCCCGAGCCACGGCCCCACAGACCCAACATGTCTCTCCTATGCGTCAAGTGGAGCCCCCAACCAAGAAAGGAGCCACACCAGCAGAGGACGATGAGGACAAGGACATTGACCTGTTCGGCAGTGACGAGGAGGAAGAAGATAAGGAGGCTGCCCGACTACGGGAGGAGAGGCTACGCCAGTACGCAGAGAAGAAGGCCAAGAAGCCCACACTGGTGGCCAAATCCTCCATCCTTTTGGATGTTAAACCTTGGGATGATGAGACTGACATGGCCCAGCTAGAGACTTGTGTGCGTTCCATCCAATTGGACGGGCTGGTTTGGGGGGCCTCCAAGCTTGTGCCTGTTGGCTATGGCATCCGGAAGCTGCAGATCCAGTGTGTGGTGGAGGATGACAAAGTGGGCACCGACTTGCTCGAGGAGGAGATCACCAAATTTGAGGAGCATGTGCAGAGTGTCGACATCGCAGCTTTCAACAAGATCTGAATGTCCGAGAGAGTGTGGTTTCATGTGTGTGAGGacctgctgagattaaagactgaGACTCTGCACTCCGCCTCTTGTGTTACTTGGTGTACAGCGCTCTGTGGGCTCTGGCTCATACTTGTCCCAGAAACAATCTATTAGGTCCACATTTGTCCACCGTGTCTCTCCTGTCCCTGCTGTTGTCACCGTGTACACCTAGACCCAGTCTAACACTCCTCTTCACACTCCTTACCTCTGGAGGGATACAtcctctttatatattctgggaTGGTTAGAATATGGACAGCCAGCTGTACTGTATGGAATTTTGTCTGCCCGCTCCCCTAAAACCCCTTGTCAGTGCTTGGGTATTGGTGGTATTGGGACGATAGTGCTCGTGAAATCCTGCGAACATCTAAGTTGAGAAAGTGTACCAAGTGTGGCTGATTCCTGTCAGTGTTGTTCATCATGGCCCCTAGTCACCAGGAAACAATGTAGCCCTCCCCCTCAAAAGTTTTAGACTTTTCCTGTGGGACCTGAACAAAAAACTGTCACCTGGGCAAGGATGACTTCGCAGTTAAGAACACTATTCTGGAAGATGGGgctcattcccagcaaccacatggaaacTTACaaaccagctgtaactccagttcctggatacctgataccctcttctggcctctgggcatgCATATCTGCCTGCAGTACAAAAAcacctacactttttttttttttttgagaataaaTTTTGCTGTATATCCTTGTCAGTttagag