Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ddx18
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name DEAD box helicase 18
Also known as 2310005B10Rik
Coordinate chr1:121481564-121495709
Strand -
Gene summary Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to be located in chromosome. Predicted to be active in nucleolus. Orthologous to human DDX18 (DEAD-box helicase 18). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ddx18

Retroname Coord Strand Genomic Region ENSG
Ddx18P1 chr1:111732502-111735550 - Intergenic
 ENSMUSG00000100555 UCSC
Ddx18P5 chr17:53666884-53669074 + Intergenic
 ENSMUSG00000117241 UCSC
Ddx18P2 chr4:28067656-28068208 + Intergenic
 ENSMUSG00000082977 UCSC
Ddx18P3 chr6:108540409-108542654 - Intergenic
 ENSMUSG00000043024 UCSC
Ddx18P4 chr8:38545688-38546211 + Intragenic
 ENSMUSG00000081517 UCSC

Expression

Transcript Sequences

>NM_025860.3
GAAGCATTTCCGCCCCGCGGGTCCGCAGGCTCCAGCGGTACACTTCCGACTTGCAATTGCGCACGTGCATCTGTCTCGGTGCAGACGGCTGGGCGGCCTGGCAAGATGTCGCAGTTACAGATGAAACTCCTGCGCAGGAAGATCGAGAAGCGGAATGCCAAGCTGCGGCAGCGAAACCTGAAGCTGCAAGAAACATCAGACACAAGCCTGTCCCAACCTCAAAATGGAGATGTGcctaaagaaacaggaaaaggtGGAAAAGTGAAAAAGGCCCTGAAACGTTCTGTGCCTGTGGACTCAGCAGAAGCACAAAGTGGAGGCATGCCTGAGGAGACCTTGGAAAATGGCAAAGTTAAAAAGTCACCCCAGAAACTCACAACTTTAGCCAACGGAGAAGCAGCACCAACACCACCTCCTGATtcagaagtaaaaaagaaaaagaagaaaaagaggaaaatggcAAATGATGCCGGGCCTGATACAAAAAAAGCGAAAACTGAAGAAAGTGCTGAGGCTTGTGAGGAACCAGAAGATGATGTGAAAAAGGCAGATGACAGCGAGGTGCCCAGCCTGCCCCTAGGACTGACAGGTGCTTTTGAGGACACTTCATTTGCTTCCTTGTCTAATCTCGTCAATGAGAACACCCTGAAGGCCATAGAAGAAATGGGCTTCAAGCGCATGACGGAGATCCAGCATAAAAGTATCAGGCCACTTCTGGAAGGCAGGGACCTTCTGGCGGCTGCGAAAACCGGCAGTGGCAAAACCCTCGCTTTCCTCATCCCTGTGATCGAGCTCATTGTCAAGTTGAAGTTCATGCCCAGGAATGGAACAGGAGTCCTGATTCTCTCTCCTACCAGAGAACTGGCCATGCAGACCTTTGGTGTTCTCAAGGAGCTGATGACGCACCACGTTCACACGTATGGGCTGATCATGGGCGGCAGCAACAGGTCTGCTGAAGTGCAGAAGCTCCTCAATGGGATCAACATCATCGTGGCCACGCCCGGCCGGCTCCTGGACCACATGCAGAACACGCCAGGGTTTATGTACAAGAACCTGCAGTGTCTGGTTATTGATGAGGCTGACCGTATCTTGGATGTTGGGTTTGAAGAAGAATTAAAGCAAATTATTAAACTTTTGCCAGCCCGTAGGCAAACCATGCTCTTTTCTGCCACACAAACTCGAAAAGTTGAAGACTTGGCAAGAATTTCTCTGAAAAAGGAGCCTTTGTACGTGGGTGTTGATGACGACAAAGAGGTTGCCACAGTGGATGGCCTTGAGCAGGGCTATGTTGTTTGTCCCTCTGAGAAGAGGTTCCTTCTGCTTTTCACATTCCTTAAGAAGAACCGGAAGAAGAAAGTGATGGTCTTCTTTTCATCTTGTATGTCTGTGAAATACCACTATGAGCTGTTGAACTACATTGACCTTCCCGTCTTGGCCATCCATggaaagcaaaagcaaaataagCGAACAACCACGTTTTTCCAGTTCTGCAACGCGGATTCAGGAATACTGCTGTGTACTGATGTGGCAGCCAGAGGGCTGGACATCCCCGAAGTGGACTGGATTGTTCAGTACGACCCTCCCGATGACCCCAAGGAATACATTCATCGTGTTGGTAGAACAGCCAGGGGCCTGAATGGAAGAGGGCACGCCCTGCTCATCCTGCGCCCTGAAGAGTTGGGTTTCCTTCGTTACTTGAAACAGTCCAAGGTTCCATTGAATCAGTTTGACTTCTCCTGGTCTAAAGTTTCTGATATCCAGTCTCAGCTGGAAAAACTGATCGAAAAGAACTACTTTCTCCACAAGTCTGCCCAGGAAGCATACAAATCCTACATAAGAGCATATGACTCTCACTCTCTCAAGCAGATCTTCAACGTGAACAACTTAAATCTGCCTCAGGTTGCTCTGTCTTTTGGTtttaaggtccctccttttgttGATCTGAATGTGAGCAGCCATGATGGCAAGCTTAAGAAGAGAGGCGGTGGTGGCGGATTCGGCtaccagaaaacaaagaaagtggAGAAGTCCAAGATCTTTAAACACATCAGTAAGAAGCCAGCAGACCGCAGGCAGTTCTCACACTGAGGCAATCTGCCTTCAGCCTGGACTGACTTTGCCCAGCTTCCCCCCTCCCCAGTACCCTTTAAAAAGGAACTTTATCACCTTTAGGATCTTTTTGTCTTTACTATgatgataatattttatttttaaatacttccataaaacaaattttatcactgttttaa