Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Psmc6
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name proteasome (prosome, macropain) 26S subunit, ATPase, 6
Also known as 2300001E01Rik
Coordinate chr14:45567280-45587138
Strand +
Gene summary Predicted to enable identical protein binding activity and proteasome-activating activity. Predicted to be involved in positive regulation of RNA polymerase II transcription preinitiation complex assembly; positive regulation of inclusion body assembly; and ubiquitin-dependent ERAD pathway. Part of proteasome accessory complex. Is expressed in several structures, including brain; genitourinary system; gut; integumental system; and vascular system. Orthologous to human PSMC6 (proteasome 26S subunit, ATPase 6). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Psmc6

Retroname Coord Strand Genomic Region ENSG
Psmc6P1 chr2:11612099-11613258 - Intergenic
 ENSMUSG00000082727 UCSC

Expression

Transcript Sequences

>NM_025959.3
CCCTATGAGCGACGGCTTCTCATCATGGCGGACCCTAGAGATAAGGCGCTTCAGGACTATCGCAAGAAGCTGCTAGAGCACAAGGAGATTGACGGCCGTCTTAAGGAGCtaAGGGAACAATTAAAAGAACTTACCAAGCAGTATGAAAAGTCTGAAAATGATTTGAAGGCACTACAAAGTGTTGGACAGattgTAGGTGAAGTGCTAAAACAgttaacagaagaaaaatTCATCGTTAAAGCAACAAATGGACCAAGATACGTTGTAGGTTGTCGTCGTCAGCTTGACAAAAGTAAGCTGAAGCCAGGAACCAGAGTTGCTTTGGATATGACCACACTAACCATCATGAGaTATCTGCCAAGAGAGGTGGATCCATTGGTTTATAACATGTCTCACGAGGATCCTGGAAATGTATCTTATTCTGAGATTGGAGGCCTGTCAGAACAGATTCGGGAGTTAAGAGAGGTAATAGAATTGCCTCTTACAAATCCAGAATTATTCCAGCGTGTAGGAATAATACCTCCAAAAGGCTGTTTGCTCTATGGACCGCCAGGCACTGGGAAAACACTCTTGGCACGAGCTGTTGCCAGCCAGCTGGACTGCAACTTCCTAAAGgttGTATCTAGTTCTATTGTAGACAAGTACATTGGTGAAAGTGCTCGTTTGATTAGAGAAATGTTTAATTATGCCAGGGACCACCAGCCATGCATCATTTTTATGGATGAAATAGATGCTATTGGTGGCCGTCGGTTTTCTGAGGGAACATCAGCTGACAGAGAGATTCAGAGAACTTTAATGGAGTTACTAaatcaaatggatggatttgaTACTCTGCATAGAGTTAAAATGATCATGGCTACAAACAGACCAGATACACTGGATCCTGCTTTGCTGCGCCCAGGAAGATTAGATAGAAAAATACATATCGATTTACCAAATGAACAAGCAAGATTAGATATATTGAAAATCCACGCAGGACCTATTACAAAGCATGGTGAAATAGatTATGAAGCAATTGTAAAGCTTTCAGATGGCTTTAATGGAGCAGACCTGAGAAATGTTTGTACTGAAGCAGGTATGTTTGCAATTCGTGCCGATCATGATTTTGTAGTTCAGGAAGACTTCATGAAAGCAGTCAGGAAAGTGGCTGACTCCAAGAAGCTGGAGTCCAAGCTGGACTACAAACCTGTGTGATTCACTAgaagggtttggtggctgcatgaCAGACATTggtttaatgtaaaaataaagttaaGGAAAATAATGTATGTATTGGCAATGATCTTATTAAAAGTGAATAAACATGTATAAGCAACATAATAGTATGTAattcagtaattttttaaaaattggtacaGAAGAAAGTCATGTTTGGTGATGTTGCATTTACTTCAGCAGAATTTACAAAAGACATCCTGAAGCTTTTCATATTTGCTTTGTGAGCATTTTGTACAACATTCAAAATGATTGAGATAGTAGAGGAGAGCATTTCTTAtgacttattttatattttgttttcctcgtccttaaaaaaaaagcaataaaatctGTTTTAAGTTGTCCT