Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps10
Plot displaying the genomic locations of a parental gene (in chr17) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S10
Also known as 2210402A09Rik
Coordinate chr17:27849389-27854218
Strand -
Gene summary Predicted to enable tRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be located in cytosolic ribosome and nucleolus. Predicted to be part of cytosolic small ribosomal subunit. Is expressed in several structures, including branchial arch; limb; maxillary process; sensory organ; and trunk somite. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 9. Orthologous to several human genes including RPS10 (ribosomal protein S10). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps10

Retroname Coord Strand Genomic Region ENSG
Rps10P14 chr15:28041061-28041321 + Intergenic
ENSMUSG00000115058 UCSC
Rps10P1 chr2:106831055-106831313 + Intergenic
ENSMUSG00000081966 UCSC
Rps10P2 chr3:116640690-116640830 + Intergenic
ENSMUSG00000105241 UCSC
Rps10P10 chr11:49588671-49589223 + Intragenic
ENSMUSG00000081570 UCSC
Rps10P11 chr12:47247074-47247209 + Intergenic
ENSMUSG00000112215 UCSC
Rps10P13 chr14:88592398-88592965 - Intergenic
ENSMUSG00000115533 UCSC
Rps10P15 chr15:98348236-98348764 + Intergenic
ENSMUSG00000115964 UCSC
Rps10P16 chr15:99813271-99813819 - Intergenic
ENSMUSG00000116255 UCSC
Rps10P17 chr16:20640851-20641428 - Intergenic
ENSMUSG00000099764 UCSC
Rps10P18 chr16:80523519-80524082 + Intergenic
ENSMUSG00000116559 UCSC
Rps10P3 chr3:95529552-95530127 + Intergenic
ENSMUSG00000060438 UCSC
Rps10P4 chr4:3978210-3978791 - Intergenic
ENSMUSG00000082991 UCSC
Rps10P6 chr5:24290200-24290768 + Intergenic
ENSMUSG00000106118 UCSC
Rps10P5 chr5:147037330-147037903 - Intragenic
ENSMUSG00000083988 UCSC
Rps10P7 chr6:13461413-13461999 - Intergenic
ENSMUSG00000107500 UCSC
Rps10P20 chrX:79240314-79240883 - Intergenic
ENSMUSG00000082346 UCSC
Rps10P8 chr8:87842217-87842439 + Intragenic
N/A UCSC
Rps10P9 chr9:58948021-58948694 - Intergenic
N/A UCSC
Rps10P12 chr13:34177310-34177542 - Intragenic
N/A UCSC
Rps10P19 chr19:41006490-41007013 + Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001364934.1
CTTCCTTTCCAGCCTCCGCCTCGGACCCTGCAGCCGCCGCGATGTTGATGCCTAAGAAGAATCGGATTGCCATCTACGAACTCCTTTTTAAGGAGGGCGTGATGGTCGCCAAAAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAAAATGTGCCCAACCTTCATGTAATGAAGGCCATGCAGTCTCTCAAGTCTCGAGGCTACGTGAAGGAACAGTTTGCTTGGAGACATTTCTACTGGTACCTTACGAACGAGGGCATCCAGTATCTCCGAGACTACCTGCACCTACCCCCGGAGATCGTGCCCGCCACCCTGCGTCGCAGCCGTCCCGAGACCGGCAGGCCTCGGCCCAAAGGTCCAGAGGGTGAGCGACCTGCAAGATTCACAAGAGGGGAGGCTGACAGAGACACCTACAGAAGGAGCGCTGTGCCCCAGAGGCGGCTTTGGTCGTGGACGTGGTCAGCCACCTCAGTGAAGTTGGAGTTTATGTTGTATTGaataaactttaaagaaaaacatgtccAC
>NM_025963.4
CTTCCTTTCCAGCCTCCGCCTCGGACCCTGCAGCCGCCGCGATGTTGATGCCTAAGAAGAATCGGATTGCCATCTACGAACTCCTTTTTAAGGAGGGCGTGATGGTCGCCAAAAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGCAGACAAAAATGTGCCCAACCTTCATGTAATGAAGGCCATGCAGTCTCTCAAGTCTCGAGGCTACGTGAAGGAACAGTTTGCTTGGAGACATTTCTACTGGTACCTTACGAACGAGGGCATCCAGTATCTCCGAGACTACCTGCACCTACCCCCGGAGATCGTGCCCGCCACCCTGCGTCGCAGCCGTCCCGAGACCGGCAGGCCTCGGCCCAAAGGTCCAGAGGGTGAGCGACCTGCAAGATTCACAAGAGGGGAGGCTGACAGAGACACCTACAGAAGGAGCGCTGTGCCCCCTGGAGCTGACAAGAaagctgaggctggggctggctCAGCCACTGAGTTCCAGTTTAGAGGCGGCTTTGGTCGTGGACGTGGTCAGCCACCTCAGTGAAGTTGGAGTTTATGTTGTATTGaataaactttaaagaaaaacatgtccAC