Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Nop56
Plot displaying the genomic locations of a parental gene (in chr2) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name NOP56 ribonucleoprotein
Also known as 2310044F10Rik|Nol5a
Coordinate chr2:130112904-130121233
Strand +
Gene summary Enables RNA binding activity. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in fibrillar center. Predicted to be part of box C/D RNP complex; pre-snoRNP complex; and small-subunit processome. Is expressed in alimentary system; central nervous system; liver; metanephros; and retina nuclear layer. Human ortholog(s) of this gene implicated in spinocerebellar ataxia type 36. Orthologous to human NOP56 (NOP56 ribonucleoprotein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nop56

Retroname Coord Strand Genomic Region ENSG
Nop56P2 chrX:156212409-156213407 + Intergenic
 ENSMUSG00000083841 UCSC
Nop56P1 chr10:56567033-56567937 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_024193.2
AGTCTGGTTCCGCGCGCCAGAGCGCGCTAGCCGCATTGCGAGCTGGGCACGGAGCAGGCGCCATGGTTCTGCTGCACGTGCTGTTCGAGCATGCGGTCGGCTACGCGCTGTTGGCGCTGAAGGAAGTGGAGGAGATCAGCCTGCTGCTGCCGCAGGTGGAGGAATGTGTGCTTAACCTTGGCAAATTCCACAATGTCGTTCGTCTGGTGGccttctgtcccttctcttcATCCCAGGTGGCCTTGGAAAATGCCAATGCTGTGTCTGAAGGTGTTGTTCACGAGGACCTCCGCCTGCTCCTGGAGACATACCTGCCatctaaaaagaagaaagtactTCTGGGggttggagaccccaagattggTGCTGCAATACAGGAAGAGTTGGGGTACAACTGCCAGACTGGTGGTGTGATAGCTGAGATCCTTCGAGGAGTTCGTCTGCATTTCCATAATCTGGTGAAGGGTCTGACAGATCTTTCTGCTTGTAAGGCCCAGCTAGGGCTGGGACACAGCTACTCTCGTGCCAAAGTTAAATTTAATGTGAACCGAGTGGACAACATGATTATTCAGTCCATAAGCCTCCTGGACCAACTGGATAAAGATATCAATACCTTCTCGATGCGCGTCAGGGAGTGGTATGGGTACCACTTTCCAGAGCTGGTGAAGATCGTCAATGACAACGCCACATACTGTCGCTTGGCTCAGTTCATTGGGAACCGCAGGGAGCTGAATGAAGAGAAGTTAGAGAAACTGGAAGAAATTACGATGGACGGGGCCAAGGCTAAGGCCATCTTGGATGCTTCTCGGTCCTCCATGGGCATGGACATATCTGCTATCGACTTGATAAACATCGAGAGCTTCTCCAGTCGTGTGGTGTCTTTGTCAGAGTATCGCCAGAGCCTACACACTTACCTTCGCTCCAAGATGAGCCAAGTAGCCCCCAGCCTGTCAGCCTTAATTGGGGAAGCGGTAGGTGCACGCCTCATTGCTCATGCTGGCAGCCTCACCAACCTGGCCAAGTATCCAGCGTCCACAGTACAGATCCTTGGGGCTGAAAAGGCCCTGTTCAGAGCCCTGAAGACAAGGGGTAACACACCAAAATATGGACTCATTTTTCATTCCACCTTCATTGGCCGAGCAGCTGCAAAGAACAAAGGCCGTATCTCCCGATACCTAGCAAACAAATGCAGTATTGCCTCAAGAATTGATTGCTTCTCTGAGGTCCCCACAAGTGTATTTGGGGAAAAACTCCGAGAACAAGTTGAGGAACGGCTGTCTTTCTATGAGACTGGAGAGATCCCACGGAAGAACCTGGATGTCATGAAGGAAGCTGTGGTTCAGGCAGAGGAAGCGGCTGCTGAAATCACCAGAAAGCTGGAAAAACAGGAGAAGAAGCgcttgaagaaggaaaagaagcgaCTGGCTGCACTGGCCCTGGCCTCGTCAGAAAACAGCAGTACCCCAGAGGAGTGTGAGGAGGTAAATGAAAAatctaagaagaaaaagaagttaaaaccccaggaaaatggaatggaagacccacctgtctctctaCCTaaatccaagaaaaagaaagctccCAAGGAGGAGTTGGCCAGTGACCTTGAAGAGATGGCCActagcagtgctaagagaaagaaGTCCTCACCTAAGGAGGAAGTGGCCAGTGAACCAGAAGAGGCAGCAAGCCCCACCACccctaagaagaaaaggaaattttctgaggagcctgaAGTTGCTGCTAACTTCACAAAGAGcagcacaaagaaaaagaaaaagtcccaGAAAGCACAGGAGGATTAGAACGGACCTGCTTGGTGGGAGGGGCATACCTTGTGGCAGCTCCTGCCCATGAATGATAaaaccccaataaaaacacaaaaccagatagta