Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Lsm1
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name LSM1 homolog, mRNA degradation associated
Also known as 2810025O06Rik|CASM
Coordinate chr8:26275326-26294003
Strand +
Gene summary Predicted to enable RNA cap binding activity; mRNA binding activity; and pre-mRNA binding activity. Acts upstream of or within negative regulation of neuron differentiation and stem cell population maintenance. Located in P-body. Is expressed in central nervous system; heart; metanephros; and submandibular gland. Orthologous to human LSM1 (LSM1 homolog, mRNA degradation associated). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lsm1

Retroname Coord Strand Genomic Region ENSG
Lsm1P1 chrX:161675474-161678227 - Intergenic
ENSMUSG00000081917 UCSC

Expression

Transcript Sequences

>NM_026032.1
GGCCGGTTCCCGTCCGCGTCCCGCCGACGGGCGACTGGACGCCCTCGCGGCCGTCCGGTGCAGCCTTGCGAGAGCTCAAACATGAACTATATGCCCGGCACCGCCAGCCTCATCGAGGACATCGACAaAAAGCACTTGGTCCTACTTCGAGATGGAAGAACACTTATAGGTTTTTTAAGAAGCATTGATCAATTTGCTAACTTAGTGCTCCATCAGACTGTGGAGCGAATTCATGTGGGCAAAAAGTACGGTGATATTCCTCGAGGGATTTTCGTGGTCAGAGGAGAGAATGTGGTCCTACTAGGAGAAATAGACCTGGAGAAGGAGAGTGACACGCCCCTTCAGCAAGTGTCTATTGAAGAGATCCTAGAGGAACAGAGGGTGCAACAGCAGACCAGACTGGAGGCAGAGAAGCTGAAGGTCCAGACCCTTAAAGATCGGGGCCTTTCCATTCCTCGCGCAGACACTCTGGACGAGTACTGAGTCCTTGCTCAGAGACTGCTCTAGAGAGCAGGTGCTGTCACCTGGTCACCTCACACATTGACCAGAGTATCACGCTGAAAAGTGATCTCATTCTTTCATGGATGCCAACATGAAGAAATCAtgggattttggtttttttaaacaaaatcattGTATATtagttttgcttttcttcttcagtctcagcacatagtcctggctgacctagagctcactgtgtaaaccagggtGACCTTTAGCTTGTGGGACTGCAGGtggcctccacctccaccagccCAGCTTTACTGTCTAAAGAAACAGTGGCGTGACCTCCCTCACACAAGTCACTGTGGAGCCAAGAACTATGTCTTTATATTGCTTATCTCAgagtttacatttcttttttaaaaatatttcatttacttGTAAATAAAAAATGATTCTCAGAACTGTCACAAAATGGAGTTTCTGGTGGAGAGTCAAAATTCCCTACTGCAACATAAGGCTGTATACATCCTAATGTATACACTAGGATGCCTACTGTGGATATAGCTGGCTCCTCAGGAGGACATTTCATACTCTGCTGCTTCCTAGTTCCCATTTTCATGTTTGTACTTGGCAGAAGTTTTAAGCTTGAGAAGGGAGTTTTCAAGGAACTGGTTACAACAGAATCCTCAGGTTTAGAAAACTTGAGCCCTGATTTACCCACAGTTTTTCCAAACTATAAGAATATGCTTTGCTCTCAATCTTACATTAACTTATCCAGATTTTCAACTCCTTTTGATCATCTTTTGCTTAGATTATCATCTATACAAGAACAACAaccctccctacacacacacacacacaaaagccctcAAATGGTGCTTAGTAACAATTGATTCATGATGACAGCACGTTTTGTTGGCTTGATTGTTGGAGAGTAATAATTGCGTAGGAAGTCTGACAGATGACACTTTAGAAGCAGTGTGTTTCAGTACACAGAGTGAGCAATGAGGCAACAGCATAGAAATTGGCTTATTGGCACACTGAAATGTTTCTCAGTAATTTATCTCGGATATATCATTTTTTATAATCTTTTGAACAGTAGTACTCTTCTCTTTCCTAAGAGGTTTGTGGACTTTTTCATACTGCAATATGAAATACACTTTTTTATGTTCTCaggtgtttaaaaagaaaaaacctacCCTGGAAGCCATTTGGCACGTGAATTCTTTATTGTTGAGTTGATTTTACAGTAGATACTTTTTGAAGTTATTGTCCTTGGattgaggatgtggctcagtaaGTAGCAGAATGCTTGCTTAGGATATGCAAGGTCCACATGTCACATGCCTAAGTACAGTGACATCCTAGTTCAGGGACAGCAGAGTGACTGGTTAATTGAGCTCTGCGTAGGTCACTTAGTTATTTCAGCATCAGTCAGACAATTCCAGTGTAGCAGCAGATATGAGTTACAAAGGGACATTCCTGCCCTTGACACCTACGTTCTTTGCAAGGTTCAGCTGTGTGAGGTTTCCAGTCCAGGTCATGCAGCAGCCTGGAAGTGGTCTTAAAAGTTAACACTGTCGGGCctgcttcccctctctccccttggGTTCTCAGCTGAGGGCCTGCTTCTGCTGCCCTTCCCTGTGTTCGTACTGAGAGGCAGTGCTCTGACCAAACTGGCCGTCGCAGGAGCAAATCCAGTTCATACTGAAAGTTCCTACCAGCTGGGGGGATTCGATTCCCCAGAGCCCTGCGTGTAGCCATGTGCATTCTGAAACTACTGCGCATGGCTGCTTCAGGCTCTTTTAATGTCTCCCGAGGCCCTTCATATTCAATTTCATGCTCTCTGCTTATTAAACCACAATATCCTCTCCCCTCTACCCTGAATagaatacaaaagaaaatgt