Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Fam220a
Plot displaying the genomic locations of a parental gene (in chr5) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name family with sequence similarity 220, member A
Also known as 1500026F15Rik|2810453I06Rik|Acpin1|Sipar
Coordinate chr5:143534475-143550286
Strand +
Gene summary Enables STAT family protein binding activity. Acts upstream of or within negative regulation of transcription by RNA polymerase II; positive regulation of protein binding activity; and protein dephosphorylation. Located in nucleus. Orthologous to several human genes including FAM220A (family with sequence similarity 220 member A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Fam220a

Retroname Coord Strand Genomic Region ENSG
Fam220aP2 chr13:67335061-67337133 + Intergenic
ENSMUSG00000114805 UCSC
Fam220aP1 chr4:58610646-58612716 + Intergenic
ENSMUSG00000083145 UCSC
Fam220aP4 chrX:74186813-74188975 + Intergenic
ENSMUSG00000080254 UCSC
Fam220aP3 chrX:133389670-133391754 + Intergenic
ENSMUSG00000070641 UCSC

Expression

Transcript Sequences

>NM_133703.5
AGGCCGCGCGGCCCGGCCGGGAATCCAGGTGGTAGCTGGTGGAGTCGCCTCCGGAGAGTGACGCGCAGACTCGGCTCCCCCGCGGCCCGCCCTCCTGCCGGCCTCGCCGCGGTCTCCCTTGCTCCCTGAGATCGCTGAGCGCTGAGCAGCGGCCCGGGAGAGGAGGCCTTGGGCGACGGGGCGCGGAGAGGGAGGGCGGGCGGGCAGTGGGGGCGCCGCGGATCTCTATATGGCGACGGCTCTGTCGGGTCTGGCTGTCCGGCTGTCGCGCTCGGCCGCCGCCCGCTCCTATGGGGTCTTCTGCAAGGGGCTGACCCGCACGCTGCTCATCTTCTTTGACTTGGCTTGGCGGCTGCGCATCAACTTTCCTTACCTCTACATCGTGGCTTCCATGATGCTCAACGTGCGCCTGCAGGTTCACATTGAGATCCACTGAAGGCCATCCTTGACTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAGGCTGGGAGAGGGACCCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGGTGACCCGGACAAACTAGCATGTGGCCTTAAgaaaagaagtcagaagaggaaccCCAGCCCATCAGTTGTGCCTTCTTGGACAGACCAGCCTGTAGCAGATAGCCATGGAAAGTCACGGGCCACGGGGGCAGCAGCCTCAGAAATGAAGCATGGTCAGAGCAAGGCCAGCCTCCTGCATCATGGTGGCTTCAAagtgcttcagtctctgaaggGATCAGTGGGGAGGAGTTCAGCCCCAGCAGCCTCCCTCGGCAAGGCTGTGGCTCTGTCCCCTGCTCCTTCAGAAGAGCAACTAGCCGGGATGTCCCATGGCATCGGGGATGCACTAGGAAGTGACTGGCCAGGAAGAGAGCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGGGTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGAAGTGGGATTCCTAAGAGGTGAACCACCAAGTGCTGGCCCCAAGGGGCTAGGCACCTGGTCAGAACTGTCTCACCGATACTTTGAGCTGGGCCAGCTGCCATATGCTTACCCCTATTATAAAGTTCTCCCAGAAGGCGAGCTGAGGTGTGTGTCCCTTGACCGTTTCAATCCCGGGCTTTCAGAGGAAACAGTAGAAGATGAGAAAACTCTCAAGTTCTTCAGATGGTCCGCAGATAGTCGTGGGGTCACTGGCTCTGCAATCTTCCAGATTAGCAAGTCTCTGATGCCATAGTTAAGGTTCAAGCAGAACAAGAAAAATAGCAGATTAACTTTAATAAAGGTTGTCTTGCAGTTTCTTTTGCATTAAGTCTGGCGTATGCTGCAGCCGTTCAGTTCCTGTTGTTTCCTGTGAACCAGACGCACCTCGGTGGTTGATGCAGAGGGGGACGTTTTCGAGCATGTTCTCAATCGTTTCGGAAAGACGCTCAGAACTGggaaccccccctcccccaggaaaATGATTGATGTGCTCCGTATAAGATCAGACAGGAACCTTTATCACAGAGTTCTAAATCATGGAGACCCATCCTCAAGGGCTAGCGTCCGGATGCCGCCTGCCTCCGCTCACCTCTGGCCATCTGATGGAAGTGGAGGCCTGTAGGCTACGCCTTCCACTTCTTGTAAGCCTTGCTTCAGTCATGAAGAGTCTTGCTTGCCATTTCTGCACTGTACTGACTCGGCCAGAGGTCCCTTCTCACGTGTCCCCCTCCTTCCGCCCGAGTTGCAGTTTTTAATGGAGGCACTTTGGAGAAGTTGCAATATTAAATTGAGGATAATTTACAATTACAGAAGAGTCTGAAGCTTTCCTGCCGACAGAACACAGACAGCAAACGAAGCAATGAAGCATTTTCCTTTATACCGGCCCAGGACTTGTGATTTCTTTTACATTAAGATTTTCTTCCAAAGTgaccctccctccttctgtgGTTTGGTAACTTTAATAAAGGTCATTTAAAGAGTGGACATTTTACAGCCTCCCTACCCAAGACAGAGTTAAAAACAGCCATGGGAGAGTTGGGGGACCCTGACTGTATATGTCATTTATATTGTGTCCTAAATTACTATGCCATGGGCTATTTTAGTGTTttgggaaaataataaaatctgttctttagcataataaatatgttttattttgtgtgtgtg