Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps20
Plot displaying the genomic locations of a parental gene (in chr4) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S20
Also known as 4632426K06Rik|Dsk4
Coordinate chr4:3831584-3835655
Strand -
Gene summary Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal protein that is a component of the 40S subunit. As is typical for genes encoding ribosomal proteins, there are multiple processed pseudogenes of this gene dispersed through the genome. [provided by RefSeq, Dec 2015]

Retrocopy(s) from Rps20

Retroname Coord Strand Genomic Region ENSG
Rps20P9 chr16:16955151-16955587 + Intergenic
ENSMUSG00000116694 UCSC
Rps20P2 chr3:22402993-22403284 - Intergenic
ENSMUSG00000102866 UCSC
Rps20P3 chr3:51543891-51544386 - Intragenic
ENSMUSG00000104166 UCSC
Rps20P1 chr3:119503163-119503554 + Intergenic
ENSMUSG00000106037 UCSC
Rps20P4 chr7:125841543-125841799 - Intergenic
ENSMUSG00000108309 UCSC
Rps20P6 chr8:61210067-61210488 + Intergenic
ENSMUSG00000109988 UCSC
Rps20P5 chr8:104950308-104950743 + Intergenic
ENSMUSG00000110551 UCSC
Rps20P7 chr9:22241451-22241777 - Intragenic
ENSMUSG00000110759 UCSC
Rps20P10 chrX:153933914-153934315 - Intergenic
ENSMUSG00000045694 UCSC
Rps20P8 chr13:53203381-53203918 + Intragenic
N/A UCSC
Rps20P11 chrX:60145709-60146024 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_026147.6
ACAAAGCACCCGGATGCGCACGTGCTTTATAAGCGCCCGGCGCCGTCCGGCCCCTCCTTTCTGAGCCCCGGCGGTGCGCGCTACGGAGCTCGGCCAGCCTGCTCCGTCCTGACTCACCGCTGTTCGCTCCTGCTGAGGAACAAGTCGGTCAGGAAGCCGCGCCTCAGCCATGGCATTTAAAGATACCGGAAAGACGCCCGTGGAGCCCGAAGTGGCGATTCACCGAATTCGAATCACGCTCACCAGCCGCAACGTGAAGTCGCTGGAGAAGGTTTGTGCGGACTTGATCAGAGGCGCCAAGGAAAAGAATCTGAAAGTGAAAGGACCGGTGCGCATGCCTACCAAGACTTTGAGAATCACTACCAGAAAAACACCTTGTGGTGAAGGTTCCAAGACCTGGGATCGATTCCAGATGAGGATCCACAAGCGACTCATTGATTTACATAGTCCTTCTGAGATTGTTAAGCAGATTACTTCCATCAGTATTGAGCCGGGAGTTGAGGTTGAAGTCACCATTGCAGATGCCTAAGACAACTGAATAAATCGTCTTAATGGTCAAATTTTGCTGGCTtttgttcaggttttttttttttaattcatgtttatgagtgtaaatgtgtgtgtcacAGGGGTGTCAGATGTTCtttgaaccaccatgtaggtgctggaaacccaACCTGCATCCTCGGAGAGAACAGgttccttaaccactgagcaagtACTGAAGCATTaaactgcttttaaaaatgaaggtgTGCTAACAGATTGGTCAGGTGAAAAAGAGACGTTAGGTTTCCTGCAGGGGGCGCTAAGCCAATTTAAAGACTAAGTTGGGTTAGAAAAGAGCAGATTGCATCCTTGATCTTTTAAGCctggggattttgttttgttttgggatagGGTCCCAACACAGAACAGGCTGACCTCATTAAATATCAATCTTATTTGATTGCCTCTGCTCccagagtactggaattaaaggcagggACCACTGTATTAGCCATTCTGAGTTATTTGAAATGGACTCTGCAGGCCATACTTGGTCAAAATTCTGCCTTCtcaattacaggcatgagccactatgccTGGTTTACTTACTAATAGATGTCCAAAGACTAGTGTATGAAAATTTTGCTTTTCCAGGTGATTTGTGAAAGGCAGGGTGGCCTCTCCCATGTCACACTACTTGGGTTACTCATGTTGCAACATATCTGCAACTTTAGGTTGAGGGGATTTGAGCCTGCATGTGCCACTTTGGCCAACTGAACTAATCTTTAATTCCATCTAAAACTTTTAAATCTCAGTCATGTGTTCAACTGGAAAATAACCTAGAGTGTGCTATGTTGACTTCAGGTACACATCAAAGCAGGTTTTAGTGATGTAGAAGCTGTGTTTGAGTTGAACTAGTGTTGAGGCTAGGCTTAGGTACCATAGaactttggtttttcaagacagggtttctctgtgtagccctggctgtcctggaactcactgtagaccaggctggccttgaactcagaaatctgcctgcctgtgcctcccaacaCACCCAGCTCTAGCTTTAAATTCCTTGCACCAAGAGATGCTTTATCCCTCCGCTGAGAATACAGGTGCATGTCAGCATGCTAAACTCTAGATAAAATTTCATCTTGTTTGAAAGGACAATAATATAAGAAAAGTGTATTTGCACTGTATACCATGCCCTTTTGTGTTTAAAGTTAAACTGGCAACAGTGTCCCATAGAGGTTCCAGAAGAAACTGCTTCTAAGGGGAGGACCATAAAGGGAAATGCTTACCATAGAACTTTTTAAATGTTCCTACAGGTTGTACTCTGGATAGGTATATGAACACCTTTCTATTAGAACAGTTTTATAGTAGTACTTAGTGAATATGTAAATAATActatttgtgaaatagtttgaggtttctctatagtcctggctggcttgaGCTCTATACCAGATTGGCTtctaaatcagaaatctgcctctatctcctgaatgGTTATGATAGAGATGCAAGTTACTTAATTTCTTACATGAATTGCACTTTGTACATGCTTTTGGATATGGGCCTAGGCTTTTGCTTTTGGATTAGACTGTCTTTATTACATTTACTGGCTTGATACTTTACAGTCTTAAGCCCACTTGCCTGggtgtgatgcacacctttaatcccagcactttgggatttctgagttccaggacagccagggctacgcagagaaaccctgtcttggaggggaaaaaaagaaactttggaAATCAAAACTTCTTGGAAAGCCACTTTTAGAGACTTGAATCTAAGGATAACTAACCAGGTAGTAACCACGAGTCATTGATTCTGTGAATCTTGTATGAGTGGGTTACAGGCAGAAATTAACTTCCTCTGAGAGCACTGCTGTTTTAGAAATGCGACCTAGTAATTACCAAAGGCATTGAAGCCACTTGACTACAGTCTCAGGTTTCTGCATCTGACATTGCTGGGACTGTGTGGGGTTTATGGGTGTAAAATAAAACAGGCGAAAGGATGTTGAGTGGAAAGCTTTGGCTTCAGAAtcaaattccaaatcaattacCAGATCAAATCAAATGCCAGATCAAATTACAAGACTTCCTTATGACTAAATTCTTCAGTGACTTAGGATACTAATAGTATCTGCCTCAAAAGTGTATGTGGTTATTTTTGTCCCAGTGAAGCCAAGATTCACATGCTATGGGCATGGATTTCCTGAGGACATGCTAGCCTATGGTATGAGTTACTTGAAAGGACTCTGAGAAATCTTAGTCCCCAGCtgtgaggtttttaaagatcatGCTCAATGGAAAGTGGGGCAGTAATTTGAGAGCATGGCACAAATGAGGTTTTATCTTTTGAAACTAAGTGAATCTATGTCCTTGGACTAGCATAttttaaatcacacatcaaatgAAATTTCTGTTCAATTCCTATAAAcagtttatttcatattttgtaGTTACCATTTTCATTAACAGCATACACCCTTCAATTGTGTTGCTAAAACTGAGTCACATTATTCTGTAAGAACTTACTCCAGTATCACAACTTGGTGCTCatccaatatttttattttcattctattttcCCTGTCTAGCCACGTATGGCCCTATTCTCTCTTCTTGGATTGACCCTAGCTTCAACACAAGAAAgcttgcagtattttttttttgcgCCTGGTTCATTGTTTTGTCCTCAAGTTCTATCCATGTGTCCAGAAATTcgaggattttttaaaatttacttttctgCCTAAATACTGGTATGTGGATAGTCTGTTATTTTTACTGTTGGTTGCATATCTGTAGCATATTTCTGTATTTGCAATGACTACATTGAATGTCCCTTAGTTAACCTCATTCTTCTTAACTATTTTGTAGGCGTTTGCTATTCAAAGCACAAtctcaattaaaatgtttttaatagca