Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Ccdc50
Plot displaying the genomic locations of a parental gene (in chr16) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name coiled-coil domain containing 50
Also known as C3orf6
Coordinate chr16:27205815-27270968
Strand +
Gene summary Predicted to enable ubiquitin protein ligase binding activity. Predicted to act upstream of or within sensory perception of sound. Located in cytoplasm and microtubule cytoskeleton. Is expressed in several structures, including gonad; hemolymphoid system gland; inner ear; liver; and nervous system. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 44 and mantle cell lymphoma. Orthologous to human CCDC50 (coiled-coil domain containing 50). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Ccdc50

Retroname Coord Strand Genomic Region ENSG
Ccdc50P1 chr4:100423766-100425351 - Intergenic
 ENSMUSG00000081553 UCSC

Expression

Transcript Sequences

>NM_001289436.1
tttCTGGCACCTCTCTCCCTCCGTACTGGACTCCGGTGCATTTCCGGCCCGGGAGAGTCCGGCGTCCACCCGGGCCAGCCCGCGGGGTGGGCGTGCGCCGTGATCTCCGCGCGCCCGAGGCCCAGCGGCCGCCATGGCCGACGTGAGTGTAGATCAGTCCAAGTTGCCGGGCGTGAAGGAAGTGTGTAGAGATTTTGCCGTCCTGGAGGACCACACCCTGGCCCATAGCCTGCAGGAACAAGAGATTGAGCATCATTTGGCATCCAACATTCAGCGGAACCGTCTGGTACAACATGATCTGCAGGTTGCTAAGCAGCTCCAAGaggaagacctcaaagcccaagcTCAGCTCCAGAAGCGCTACAAAGCCCTTCTTTGTACCCATGTCATGAAGAAAATAATCTCTTGTCTTCTGACTTGAACAACATGATTGTGAAATTGCTCAGGAAATCCAGGAGAAGCTAACCATTGAGGCTGAGAGACGACGCATTCAGGAAAAGAAGGATGAGgaCATAGCACGTCTTTTGCAAGAGAAGGAGCtacaggaggagaaaaggaggaagaaacacACTCCAGAGTTTTCTGGGGGCAGTGTTTTTGGAGATAACTACTATCATGAGGATGGAGGAATGAAACCAAGAGGAATAAAAGAAGCTGTCTCTACTCCAGCACGAGCAAGCCACAGGGACCAGGAGTGGTATGATGCTGAAATTGCCAGGAAATTGCAAGAAGAAGAACTTTTGGCTACTCATGTGGACATGAGAGCAGCTCAGGTTGCCCAGGATGAGGAAATTGCTCGACTTCTAATGGCTGAAGAAAAAAAAGCTTACAAGAAAGCCAAAGAGCGAGAAAAGTCATCTTTGGACAAAAGGAAACATGACCCTGAATGCAAGTTAAAAGCAAAGTCAGCCCACTCAAAGTCAAAAGAGGGTGATGAAGCACACCGCTCCAAGATTGACAGGCCATCAAGACCACCACCACCTACCATGATGGGCCTTGAGGACACAGATCCCACCCATTTTACAAACCAGCACAGTACAACATGGCATCTTCCAAAGTCAGAGTCCTCACAGAAAGGCTTCCATAACAAGCagtaaaataatacaaacaaaaagggaTCGGCCTCGAAAATGGACTTCGTATAGCACATATTACTTCTTATAGCACATATTACTGAAAGATACAACATGCATTCCACGTTGGCTGTTGTCCTTCTGTGTGCCATTCTGGGAGTTGCTCTCAAGTGTTTTCTTAACTAAAAAAGTACTTCACTTCATTTTAAACTTTTGGTAATTTTGGTCACTTTGGCCGTGTAAGAAATGTAGCATCTGAACATTGGCCGTCTCTTCTGTGGATATGTTTCCTGGGAtgtagtaattctataaaattattacaCAGTTGCTAGTCATAGGATATTGGCGTCTAGGGAACTGAGTTTCTTTAGCAATTAGAAGTGCACAGGGATTCATTATGAAGTCAAGCATAGCGTTTGGATGGATGAGGTGTAGGAAAGCTGTGGAGCAGCTGCTTTGCTGTTTATTATGATAGTTTGAAAGATACAGCCTTTGCTTTTTTatccttttcagaaaaagaaaagccacaacaataaagtacaggaaaacacacagagCAGTGAAGTGTGTTCCTCTGAATAAATGGATGGGTAGAGGCTCTAGATGGCCTTGTAACCCTCACTCGTTATCGTGTACTGCTGTTTCCTCAGGACCAGGTCTTTTTGATGCCCTTAGGCAATGAATCATGTGTTAATATTAATTTGTATAGACTTTAATTGTCTGATACTTTCTCTCAGGTCCATGAGGCGTCAACTCAAAATTAAAGAACAAACAGCCTTCCATTGCCTTGCTTTTCTAAGTTAATTATAGAGCCAAAGGAATAGAACAGTTTCCATAGGACTTGGTACCATCCGCCCAACTAGCTGTGCACATCCAGCCTCCTGCTCCCAGGATATAGCAGTTTTTGTTGGCAACCTTGCAGTGATGTTTTATGCACCTGCAATATTAGATTAGTTCAGTGTGAAGTTGAACGTGATGAAGTGAGTCACTATCCAGGTGTATACATCTAAGCTGATGGTCATTGTATTCCTCTCTGTAAGACCTTTAAGCTCCTCTATAAAACTTTGTGTATTCATCCATACCACTTACTCAATATCAATGGCAGCTATGCTGAACCTATATATGATTGCCATTTTCCCAGCTTGACTTCCTGTTCTTTTCAATGTGTGGGTCTGACATTTTCTGTCATGTCAGTATGCTGTttatttagaaaagaagaaaacaaggttgctgaaagaaataatttaaggACTGCCTGCCTTCCATTTGCCTTGTCTTTCCAAACTGTCTTAAACTTGTGGAGGGTTCTGGAAGGCTGCTCCCAACAGATTTTGATCTCTGATTTTGAGAACAGTCTTTTGTTTCATAAAATGACACCCGATAGAAATTTGAATGAAAAGTGGCTAAGAGTGATGCTGTGGGAGCAAATGCAAGGGAGTGAACTGCAGGCCTGCGTGTCAGCCAGCAGATCCATGCAGGAGATCCTCCTTCTGCGAAGGAGGCAAAGGGAAAGCCCCGCCTTAAGCCAGAGTCTACACAGTGCTTTCCTCCCAGCTTAGTGTAATGCTATATCTTTCATTATCTGCCCTGTGATCTTacttcatgtttttaaaagatattttgaaagggtaactttaaagaaaaaaaatatagttgCATTTTTATTTGCTAATTAGGCAAAGCAGGCAACATCTTCtgccatatttttgtttttataaatatttatttttctatctcaTGAAATGATcacttttaactttaaaaactgtatttcttttgttttgcatgaACTTCACTTAATCATATTTATTACTGTAAAATGTACatgttttagtttaaaaaatgcCAAGCCACTTAACCAGAATGCTGCAGTCTTACCTGTCGCCGTGGATGGCCAGAGGCAGTGCAACCTGTGTGATGGCTAGCTCAACATCAGTATTGGaaattttgttacattttaagttctttttaaagtctacagttttaaaatattttgtttgtcttattttacttttgtaaaGTGAACAGTTTTTTTAAGAGTACCAGTAATTATTATGAGTaagaagatagaaaaatattcttatttattcttACTTAGAATTTTTTCTATCAGTCAAATAATATATCTTTGAGATGATTGAAACAACTAACAGCTCTTACTGAACTGCCAGTCTTCACTGTGgtctctgctttttaatttttatattgaaatgaaagcatttattttgtTCCTGTTATTGAGCACATGCAATTTAACTTATGAGGTCCACACAGTGTTATGTCTTGCTGTCAACATAAGAGTAATCCTTCTAGCTTTGGGAAATCTTTTTGTTTCTCAACTGTTTTTCTCTGCAGGCCATGTGCTGTTAACAGCAGCATTCCTGGATGAGCACACTATGTTAAGGAGCCTCATTATGAGACTGGTGTGTCACTCTCTCATTTCCATCCTAGAAAAGGGGCTAGATAAAAGTCAGATTAAATATGCTGACCTGAAAGAAAATTAATTCCAGTATTCAAGCTACTGTTAGTCATAATTGCCTTATTGGGAGAATAGAAAAATGCTTCTTTTGTGCTCAAAGAATATTGAGATTTTTTGCAAATGGCTTTGCATGCCATTGAAATGCTATGGGGTCAAGTGACTTTATGACAAATGGCAGTTGGTAATGAACTCAAAACCAAACTATGTATTTCTGATCTTGAGAAACATCTAAATTAGGAAGAGAGGTATGCATAAAAATGTGCCCAAAGAAAACtcttcacagtggcctgggtCACTACACCTAGGCAGCAGTCTAAAGTATGTGACCTGTGGTCCACTGGATGCTTTAATACTATCAGAGCTTCTCTTAAGTCACTTTGtgccaaatttaaaacaaaaacaaagacaaaaaacatatTGTAATATGGTGCATTCTGTTTACCACATAAGTGGTTAACATTTTACAGCCTTGACTTATAATATGAGTAATGCCTTTGTATAAATCTCACTTTGGGAAACATGAAAATGTTACTCTCCTTTAAAAGGTAACTTCTAATTGGCTGAGAGCATCAGCCTATTGAAGAGATGAGGCCCATGTAGAAATAACTCGAAGGCCTGAGATAGAATAGAGCGTGCAGTAAATGGCTACTTCCATTTGGGGAGGGTGGTGTTTGTGGAAGGAGCGCTGACATTGAAGTCACACTGACAAGGAGACATTGTTCCCTTTGATTTCACTGTGAACTCCGTGCCATGTTCTCATAGGACACTTGTACAAAACAGTCCCTACAACATTGAAAACCCGACCTTTGATTTATAGAAGTCTGTAATGTGTCTGTCATATGCTGTTTATGACTCGGTCACTCATTCTCTCTTCCTATCTCACAATCAGAGAAGTGACCCAGGAGAgtcagctcctctctctctctctctctctctctctctctctctctctctctctctctgtctctgtctctgtctctgtctgtctgtctgtctatcggTGCCTGTATGCTGTAGAGCCATATCTGTATCTGACTGGTGACTGATGCTTCCTTCTTCCCACCCTGTAACAAGGCAGTGCAGGCAGACAGAAGCCTCCTGTGGAGTACCCTGTCCACGCTGCATGCAACAGTATTAGCTGAATATGTGctgggaggtttgtttgtttggttagtttttaTCATGGTGATATGTAAGATAATTAAAGGGAAGAGTTAAAGGCTTTGTTGCGTCTGCTATAACTCATCAGAAATGCTCAAATTTCATCGTAGCGTCTCCAAGAAGGTAGAGAGCTTGGAAAACATTAGTTATAGTCACCTTTCTGATGAGCCCTGCACTTTATGTCAGCAATGTCTGTGGAGATCAGTTTTGCCTTAAATTAGTTTGAGTCCACCCAAGGCCATTGTGCTTAGTATCATGAGCACTTGTCAGCTCTCCATTAGCATGCAGTTCATAACAGAGCttcaagcagcagcagcacccaGAGCTTTGAACCTCGCCCACTGTGCTCTGGGTGACTTGTAACATTAATAGGAATATCTTCTCAGTTCCCTGATAGCAGCGGCATGGCCAGAGCACTGCTGTGAGACAGTTCCCTGGCTGGAGTATTCACCCAGTGTTAACTTTCTGAACAGTTGGGGGGttcttatcctttttttttttttttaatggtgactACAAAAGATTAGAACAAAGGTTCTTTGGTTCAGTGACAATACTCAGATTATTTCTAAGAATTTTAGCGATGACCTTTGTGTATTGAAAAGCTTATTTACCATTAACAAATACAGGAGaaacctctccccctcccccaaatggaTGTATTACTTGGAATCGTGATCTGAAAAGTGCTCTAGTTTATTTCTTTTAACAGAATTAAGCAGTTAAATGTGGCTATGGTTGAAAAGATAGAAGAACAGCTTTTCTAGGCTGCACACAGAAGAGTACAGTTATGCAGGTAACCACACTGATTTACATACGTGTTTGCCACTAAAATCCATTTTCTGCCCTTATAAATTCGAACACTGCTACTAATATGGTCATATAGGTTTCATATGCCTCTGTGTattacaagtaaaaaaaaaagttttttctcctcattttaaaaagttacttttcATAATATGCTGACTTAAGCATTTTAGATCAGGGCAAGCTTAATTATGTAACTGTGTTGCCCAGGTTTTTATTGGTGAAATTCAAATATGAAGATGAGAAAAAATTCAAAAGGTTTGAGTAACAAATTAGCAAGAATTGCCTACAGTAAAGAGTAGGCATTGAGAGGCTATGCAGTAATGGGTGGCAGTCTTTGGATATATTGCTACACTGATTTCACACTATGCTGAAATTGATTCTAGCTAAAAATTTGATAAGAGTTTGGGTGTGAGAAGTTTTATACTTATGTATGAATCGTTTCTAAATTCCTTTAGATTGTAGACCTTGATGTAACCCGAAAGGCAGATGTCCTATCCCAAGGATAGCTGTATTTTTCATGGTTTTAAATGAGCAACCAGATATTCATTTCatgaaataatgtaaatattagaAAGTAATATGGATAAATGACATATAAAAGTGACATTTCCAAATGACAATTCTCTGTAATGCCTGTTGTCTGCTAAGAAGAATCTATCCCTGTGAAACATTTGAAAGGTGCTGGATTTGAAAGTACTAGAGTTTGTTACATAAATCAAGTTTCTCAGGATATTTGAGGTGATACTGCCATTTATTTCTGttataatttggaaaaaaatcatttcttttgttACACTATGAGGAAACTGCACACTTTATTTGGTAAGAGTCCTTTAAGTTCAGTAACCTAGAGATGAGTATAAAACAAGTGTGGGATCCCAGCGCTGGTCAGTTTACGGTCAGCCCACCCCTCAGTGGGGAGGTGTGAAGGAGATCCCAGTGCTGGTCAGTTTATGGTCAGCCCACCCCTCAGTGGGGGGTTGTGCAGTACATATTTTATGGAGCTGAATGGAACTTCAATAGAATATCGTCCCTTGTCTGAGGAAAGACCACCTCAACCACATGCCTATCTAGAGATTGAATAAAACTGTGAGGAGACACTGTGTGGATGCCTTAAGATGGCTGGCGCTGGCTGCAGGGAACAATCTATTTCAGCTCATCTTCATAAAGCCCAAGATGCTCCCGTGCATAACCTTGTTGAAGAAATGAGAAATGCGGTGCTGGCTACTTTGATGTGTCTGGGGAGGCTGGCGTCATTGGTTACCATCATTAAGTCACTGTCCAGTGCCCAAGCCTTCCTTCACTACCACTCATATGTctacatccattcattcatctatgCAAGCTTGTGTTTTTGTGGTTTGTATTTTACACCTGGACATCAGGTTTAACATtggtgttttaaataatttttaaaccaAAGTATTTTATGAGTAAGTCTATGTGCTCTGTTTTTGTGAATGTTTTGAGATAAATACCTATCTTGTTTTCTCTTAATAAAGTCATCCATTTATTAAGTCAA