Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rpl38
Plot displaying the genomic locations of a parental gene (in chr11) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L38
Also known as 0610025G13Rik|Rbt|Ts|Tss
Coordinate chr11:114558644-114563159
Strand +
Gene summary Predicted to be a structural constituent of ribosome. Acts upstream of or within several processes, including 90S preribosome assembly; middle ear morphogenesis; and sensory perception of sound. Part of eukaryotic 80S initiation complex. Is active in synapse. Is expressed in thymus primordium. Used to study otitis media. Orthologous to human RPL38 (ribosomal protein L38). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl38

Retroname Coord Strand Genomic Region ENSG
Rpl38P7 chr9:72458969-72459259 + Intragenic
Intragenic
ENSMUSG00000099310 UCSC
Rpl38P13 chrX:52764779-52765025 + Intergenic
ENSMUSG00000082616 UCSC
Rpl38P6 chr7:28149935-28150188 + Intergenic
N/A UCSC
Rpl38P2 chr1:157448806-157449082 + Intergenic
ENSMUSG00000102245 UCSC
Rpl38P12 chrX:20777842-20778000 + Intragenic
ENSMUSG00000080757 UCSC
Rpl38P10 chr18:76357000-76357367 - Intergenic
ENSMUSG00000118294 UCSC
Rpl38P4 chr6:140622928-140623128 - Intragenic
N/A UCSC
Rpl38P8 chr12:10418419-10418663 - Intergenic
ENSMUSG00000112377 UCSC
Rpl38P3 chr4:138153048-138153353 + Intergenic
ENSMUSG00000083326 UCSC
Rpl38P5 chr6:52323674-52323988 - Intergenic
ENSMUSG00000059159 UCSC
Rpl38P11 chrX:141195722-141196003 + Intergenic
ENSMUSG00000071680 UCSC
Rpl38P1 chr1:150431998-150432192 - Intergenic
N/A UCSC
Rpl38P9 chr14:62915555-62915801 + Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_001048057.2
CTTTCCCCGTTCTCTTCGGTTCTCATCGCTGTGAGTGTGCTGGGCAGGTGCGGACGCCAGAGCCGAGCCCGCGTCGCCATGCCTCGGAAAATTGAGGAGATCAAGGACTTTCTGCTGACAGCCCGGCGGAAGGATGCCAAGTCTGTcaagatcaagaagaacaaggaTAATGTGAAGTTCAAGGTTCGCTGCAGCAGGTACCTTTACACCCTGGTTATCACAGAcaaggaaaaggcagagaagctGAAGCAGTCCCTACCCCCGGGTTTGGCAGTGAAGGATCTGAAATGAACCAGCCCTCTGCGTGTGACTATTAAAAACCCTGAAAAGTGTT
>NM_001048058.2
CTTTCCCCGTTCTCTTCGGTTCTCATCGCTGTGAGTGTGCTGGGCAGGTGGGGAAGGGCGTTCAATCCGGGGCGATCCGCAGCCGGGGAGGGCGCAGGGAGCACGGGTGCGGACGCCAGAGCCGAGCCCGCGTCGCCATGCCTCGGAAAATTGAGGAGATCAAGGACTTTCTGCTGACAGCCCGGCGGAAGGATGCCAAGTCTGTcaagatcaagaagaacaaggaTAATGTGAAGTTCAAGGTTCGCTGCAGCAGGTACCTTTACACCCTGGTTATCACAGAcaaggaaaaggcagagaagctGAAGCAGTCCCTACCCCCGGGTTTGGCAGTGAAGGATCTGAAATGAACCAGCCCTCTGCGTGTGACTATTAAAAACCCTGAAAAGTGTT
>NM_001362918.1
CTTTCCCCGTTCTCTTCGGTTCTCATCGCTGTGAGTGTGCTGGGCAGGTGGGGAAGGGCGTTCAATCCGGGGCGATCCGCAGCCGGGGAGGGCGCAGGGAGCACGGGTGTGcggggagcgagggagggaggagggaggggtgcGGCGGGCGGATCGGGGAAATAGGATCGCGGCCGGTTAACTCGGGATTGTACCCCGCAGGTGCGGACGCCAGAGCCGAGCCCGCGTCGCCATGCCTCGGAAAATTGAGGAGATCAAGGACTTTCTGCTGACAGCCCGGCGGAAGGATGCCAAGTCTGTcaagatcaagaagaacaaggaTAATGTGAAGTTCAAGGTTCGCTGCAGCAGGTACCTTTACACCCTGGTTATCACAGAcaaggaaaaggcagagaagctGAAGCAGTCCCTACCCCCGGGTTTGGCAGTGAAGGATCTGAAATGAACCAGCCCTCTGCGTGTGACTATTAAAAACCCTGAAAAGTGTT
>NM_023372.3
CTTTCCCCGTTCTCTTCGGTTCTCATCGCTGTGCGGACGCCAGAGCCGAGCCCGCGTCGCCATGCCTCGGAAAATTGAGGAGATCAAGGACTTTCTGCTGACAGCCCGGCGGAAGGATGCCAAGTCTGTcaagatcaagaagaacaaggaTAATGTGAAGTTCAAGGTTCGCTGCAGCAGGTACCTTTACACCCTGGTTATCACAGAcaaggaaaaggcagagaagctGAAGCAGTCCCTACCCCCGGGTTTGGCAGTGAAGGATCTGAAATGAACCAGCCCTCTGCGTGTGACTATTAAAAACCCTGAAAAGTGTT