Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Nsmce1
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name NSE1 homolog, SMC5-SMC6 complex component
Also known as 2510027N19Rik
Coordinate chr7:125066816-125090615
Strand -
Gene summary Predicted to enable protein dimerization activity and ubiquitin protein ligase activity. Predicted to be involved in double-strand break repair via homologous recombination; positive regulation of response to DNA damage stimulus; and postreplication repair. Predicted to act upstream of or within DNA recombination and DNA repair. Located in chromosome, centromeric region; mitotic spindle pole; and nucleus. Part of Smc5-Smc6 complex. Is expressed in pancreas epithelium. Orthologous to human NSMCE1 (NSE1 homolog, SMC5-SMC6 complex component). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nsmce1

Retroname Coord Strand Genomic Region ENSG
Nsmce1P1 chr4:99504064-99504771 - Intergenic
 ENSMUSG00000083698 UCSC
Nsmce1P2 chr17:32949961-32950911 + Intergenic
 ENSMUSG00000117651 UCSC

Expression

Transcript Sequences

>NM_001377012.1
attatcattaatcTAATTGTGGAGCCAGAATTCATGTTGCCTGTCACGCAGAGGCAGAAATTGAATCCTTAAGCCATGCTTATTCATTGAGCTGGCAATCTTGGAAGAcagaactaaaatttaaaaaaagaaacatctgaGACAGGCATGGTAGGTAGTTcatgcctttcatctcagcatgctcaggaaacagaggcaggcagagacaggagtatttatttctatgagtttgaggctagtctagtCTTCATGGTGAGTTTTAAGCCAACCCGGACTATATAGTGtgactctttctcaaaaaaacaaaaacaaaaaacaaaaaacaaacaaacaaacaaaaacacccaaagaTCTGCTTTCCTCTTCTCATCTTCAGAAAGCTAATTTTTAGGGATTGGGAAACAGAGGCTGTCAGTCACTCCAAAGCATACTCTTGGACCTCTGGTCACGTGGTCAGCCTAGCCTCCAAGATCCCGGATGCTTTTCTGGATATCCTCTGCAGAGTTTTTCTTGTGTTTGGAGAGAAGGGGACCAGAGTGTGATCTCAGTTGTGTGGCTGCGTGGCCTGCACCATCCACCCAGCCCCGCCCTAGCCCCGCCCAAGCCCCGCCTGCCTGGCAGGAGCAGctcCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGTGCTGGAGGAGTGGGAGGTTCGGCGTCTGCAGAACCACTGCTACCAGGTCCATGACCGAAATGCGACTGTAGATAAGCTGGAGGACTTCATCAACAACATCAACAGTGTCCTGGAGTCTCTGTATATTGAGATAAAGAAAGGAGTCACGGAAGATGATGGGAGACCCATTTATGCACTGGTGAATCTTGCTACAACTTCAGTTTCCAAAATGGCTACGGATTTTGCAGAGAACGAGctggatctgtttagaaaggcTCTGGAACTGATCGTTGACTCAGAAACTGGCTTTGCTTCTTCTACAAACATTTTGAACCTAGTTGAtcaactcaaagggaaaaagatgaggaagaaggagGCCGAGCAGAAGGAGGGAGAGTTCACCTTGCATGGCCGGGCTATCTTGGAGATGGAGCAGTTCATCCGAGAGAGCTACCCAGATTCTGTGAAGATGTGCAACATCTGCCACGGCCTCCTCATCCAGGGTCAAAGTTGTGAGACGTGTGGAATTAGGATGCATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCACTGTAATGACTACTGGCCCCACGATATACCAGAAGTCTACAACcctgagaaggagagggaagctgGCATCTCCAAGTCGAGCAGAAAGTCCTTACGGACCCGGCAGCACTAGCTGTGTCCTGCATCGTTCTGGGCTGACCCTCACAGTCCATTTAGGACTGCCGTGCCTCCTTTGTTATTTGTTCTTAACACGTTTTTAGTAAATGTTTCCTGATGGCGCTGTGCTCTGTAA
>NM_026330.4
ATGGCTTCCGGCGTGATCTCGCTGGTTTGCGctcCCTCCAACATGCAGGGCAGCACGAGGAGAGCAGGAGCCATGACGGATGTGCACCGGCGCTTCCTCCAGCTGCTCATGACCCACGGTGTGCTGGAGGAGTGGGAGGTTCGGCGTCTGCAGAACCACTGCTACCAGGTCCATGACCGAAATGCGACTGTAGATAAGCTGGAGGACTTCATCAACAACATCAACAGTGTCCTGGAGTCTCTGTATATTGAGATAAAGAAAGGAGTCACGGAAGATGATGGGAGACCCATTTATGCACTGGTGAATCTTGCTACAACTTCAGTTTCCAAAATGGCTACGGATTTTGCAGAGAACGAGctggatctgtttagaaaggcTCTGGAACTGATCGTTGACTCAGAAACTGGCTTTGCTTCTTCTACAAACATTTTGAACCTAGTTGAtcaactcaaagggaaaaagatgaggaagaaggagGCCGAGCAGGTGCTGCAGAAGTTTGTGCAGAGCAAGTGGTTGATTGAGAAGGAGGGAGAGTTCACCTTGCATGGCCGGGCTATCTTGGAGATGGAGCAGTTCATCCGAGAGAGCTACCCAGATTCTGTGAAGATGTGCAACATCTGCCACGGCCTCCTCATCCAGGGTCAAAGTTGTGAGACGTGTGGAATTAGGATGCATTTGCCTTGTGTGGCCAAATACTTCCAGTCCATCCCTGAACCACACTGCCCCCACTGTAATGACTACTGGCCCCACGATATACCAGAAGTCTACAACcctgagaaggagagggaagctgGCATCTCCAAGTCGAGCAGAAAGTCCTTACGGACCCGGCAGCACTAGCTGTGTCCTGCATCGTTCTGGGCTGACCCTCACAGTCCATTTAGGACTGCCGTGCCTCCTTTGTTATTTGTTCTTAACACGTTTTTAGTAAATGTTTCCTGATGGCGCTGTGCTCTGTAA