Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Atp5g2
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9)
Also known as 1810041M08Rik|Atp5mc2
Coordinate chr15:102571303-102579482
Strand -
Gene summary Predicted to enable lipid binding activity and proton transmembrane transporter activity. Predicted to be involved in ATP synthesis coupled proton transport. Predicted to act upstream of or within ion transport. Located in mitochondrion. Is expressed in several structures, including alimentary system; eye; genitourinary system; heart; and nervous system. Human ortholog(s) of this gene implicated in renal cell carcinoma and urinary bladder cancer. Orthologous to human ATP5MC2 (ATP synthase membrane subunit c locus 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Atp5g2

Retroname Coord Strand Genomic Region ENSG
Atp5g2P5 chr11:84986009-84986519 + Intragenic
ENSMUSG00000083876 UCSC
Atp5g2P6 chr12:80675924-80676322 - Intergenic
ENSMUSG00000112047 UCSC
Atp5g2P7 chr15:76681907-76682374 + Intragenic
ENSMUSG00000090429 UCSC
Atp5g2P8 chr17:5866328-5866975 - Intergenic
ENSMUSG00000068120 UCSC
Atp5g2P4 chr9:120214016-120214548 + Intragenic
ENSMUSG00000082356 UCSC
Atp5g2P2 chr7:23646070-23646715 - Intergenic
ENSMUSG00000066724 UCSC
Atp5g2P1 chr2:113963068-113963302 + Intragenic
N/A UCSC
Atp5g2P3 chr8:85580655-85581235 - Intergenic
N/A UCSC
Atp5g2P9 chrX:160270788-160271210 + Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_026468.2
ccctctctgtcttctctgcccTGGGAGCAGCCCTCCTGCCTCGGCCCCTCACCCCTGAAAATGTACGCCTGCTCCAAGTTCGTCTCTACCCGCTCCCTGATCAGGAGCACCTCTCTCAGGAGCACCTCTCAGCTGCTGAGTCGTCCGCTGTCTGCAGTGGAGTTGAAGCGACCACAGATGCCAACAGATGAGAGCCTCAGCAGCTTGGCGGTCCGGCGGCCTCTGACTTCACTTATCCCTAGCCGCAGTTTCCAAACCAGCGCCATTTCAAGGGACATCGACACAGCTGCCAAGTTCATTGGAGCTGGGGCTGCGACAGTTGGGGTGGCTGGCTCTGGGGCAGGGATTGGGACTGTTTTTGGGAGTCTCATCATTGGCTATGCCAGGAACCCTTCTCTGAAGCAACAACTCTTCTCCTACGCGATTCTGGGCTTTGCCCTCTCAGAGGCCATGGGGCTCTTTTGCCTAATGGTGGCCTTTCTCATCCTCTTCGCCATGTGAAGCAGCTGTCTCCACTTCCACCTCCCATGGTTCTTTCGTGTCTCGTCTGCCCTGTATGTTCCTTTTCCTGTAACTCCCCAAGAAGTCTGGGGAAAGTGCTTGGCTCAGGGTTTGACAGAGAGAAGACAAATAAATACTGTATTAAT