Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Pclaf
Plot displaying the genomic locations of a parental gene (in chr9) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name PCNA clamp associated factor
Also known as 2810417H13Rik|Ns5apt9|Ns5atp9|PAF15|Paf|mKIAA0101|p15(PAF)
Coordinate chr9:65797605-65810833
Strand +
Gene summary Predicted to enable chromatin binding activity. Predicted to be involved in several processes, including cellular macromolecule biosynthetic process; centrosome cycle; and response to UV. Predicted to act upstream of or within DNA repair. Predicted to be located in centrosome and perinuclear region of cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including branchial arch; central nervous system; facial prominence; limb; and skin. Orthologous to human PCLAF (PCNA clamp associated factor). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Pclaf

Retroname Coord Strand Genomic Region ENSG
PclafP1 chr1:156621099-156621928 + Intergenic
ENSMUSG00000046057 UCSC
PclafP7 chr13:30583583-30583866 - Intergenic
ENSMUSG00000083882 UCSC
PclafP9 chr15:25681816-25682623 + Intragenic
ENSMUSG00000089639 UCSC
PclafP10 chr19:6077193-6077966 - Intergenic
ENSMUSG00000118194 UCSC
PclafP4 chr6:25976250-25977145 - Intergenic
ENSMUSG00000107127 UCSC
PclafP5 chr7:110126016-110126845 + Intragenic
ENSMUSG00000060777 UCSC
PclafP2 chr2:39547302-39547465 + Intragenic
N/A UCSC
PclafP3 chr5:66118856-66119447 - Intragenic
Intragenic
N/A UCSC
PclafP6 chr11:31928001-31928235 - Intragenic
N/A UCSC
PclafP8 chr14:70959995-70960916 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_026515.2
AAAGAGACCCATTTAAACGGTGGCGGGAACATCATTTTCGGGTTCTTCTCTAATTGAGACATCTGCAGTTGGGGTGACGGTGAAAGTTGTCTCTTCTTGTGTGAACATGGTGCGGACCAAAGCAAACTACGTTccaggagcctacagaaaagCGGTGGCTTCTCAAGCCCCTAGGAAGGTGCTTGGCTCCTCCACCTTTGTCACCAATTCTTCAAGTTCGTCGAGAAAAGCTGAAAATAAGTATGCAGGAGGGAACCCAGTCTGTGTGCGCCCAACTCCCAAGTGGCAAAAAGGCATCGGGGAATTCTTCAGGCTGTCCCCTAAAGAGTCTAAAAAGGAAAACCAGGCTCCTGAAGAAGCAGGAACCAGTGGCTtaggaaaagcaaagagaaaAGCTTGTCCTTTGCAACCTGATCACAGAGATGATGAAAACGAATAGAATTTACTCATCTGAATAATGTCTCCGGTTTTTCTACATTACTTACATGTAAATTTGGGTAAATGAGTTTGTCCAATTGGCttgttgaggggaaaaaaaattaggCTAAAATTTAGCCATTCAAAAGAAACCAGATGTAAGAATGGAGAATTTTTATAATTTGTAAATTTGAATTGCATGCTTACACTTATGCCCTATGCTCCTCCTTTCTTACCTGTTAAAGCTTCTTCTTAAAGCCAACGTTCCCTGGCACTCTACTTGCTACTCTACGGTCTTTGCTTAGATTTTTGTACTGATGCCATTTTATGGGCAGTGATTATGGAAATGACGCCATATTGTTATGGCATGTTTGCTTTAAAAATTTGActtaggctgggtgtggtggcgcacgcctttaatctttaagagtgagttccaggtcagccagggctatacagagaaaccctgtctcgaaaaaccaaaaaaaaaaaaaaaaattgacttagtcttttttacattaaaattttcaaTATTACCTAAGTAAAATCTCTTGTCATTTATCAGAATGGGTTGGGGAGGCAAAGATAAAATGCTGAAAAGCTAGTTGTGTATCTTTTTAAGGAAATGTTAGCTGGGTGTTAAAGGGCTGCACACCTTtggtctcagcactgaggaggcaaagccaggtggatccctgagtctCAGGCTATAGAGGGAGTTCCAGCCAGCCAGGACTAGGACTATACAGAGgatctctgtcttgaaaaaacaaaaagaaagaaaagagttaaaAGACCAGTTTGTCTTGAGGACTTAACTAGTTGACAACCATACAAAGAGATAAAATACTAACAGAAGCAGGGACAAAGACTCCATAGATACattaaaaggatttttttggATATACATTCAGTTCGTTATCATAAAACAGTACTTTTTTTCATGTACTACTTTTTCTTTCCTATGTACCCCCTGACAGCTCCTCTGTTAGCCCGgcttgtcttggaactcacttggcAGTCAGGCTGAGGTGGGATTCAAGGTGGGCACCACCACGCCCTTAGATAAAATAATGAGACAAATCGTGCTGCAAATCAGGTTTTATATGTCAGGTCCTTAGCATTTCCCCGTCATTTCTCAAGATGACTTGAGATCATTGAACTTATAGATATAGTAGTaactgttttgagataggatctcattatatagcctCTTAGGTGGCCTTATGTAGAACACGctaaccttgaattcacagagatctgcctatctgtctatcatctgctaggattataggtgggAACatgcatttttactttttattttgttatatttatctcattttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcttgtatgcacACGAAATTGTGTGTTTGGGTATGTGTGGAGGCTCAAGGATGCTATTGAATCTCCTGTATTCACAACACAAGGAACCATGGGTATGTCaaccagggtagcctcaaacttcctctttttttttttttttttgtaatcctACTGTCTCAGTCTCCCTGGGTGCTGGGGTTAACGGTGTGTACCCCCATAATAAATGATATACTTGACTTTCTCCTCATGGTTTGACAGACTATCACTTTTTCAAAATTAACCATGTTTTTGGCAGCCTAtcttttttacattaaaattttcaaTATTACCTAAGTAAAATCTCTTGTCATTTATCAGAATGGGTTGGGGAGGCAAAGATAAAATGCTGAAAAGCTAGTTGTGTATCTTtttaagggtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaaatccaactgcttAGACATTAAGCAGAACCTCTTTCAATCCAAAGTACTTTGAAAATCATGtttcttgtttctctgttttttgtttgtgcttttgcctttttaaataaacatttatttttattttgcatacatg