Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Rpl22l1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein L22 like 1
Also known as 3110001N18Rik
Coordinate chr3:28859657-28861573
Strand +
Gene summary Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be located in cytosol. Orthologous to human RPL22L1 (ribosomal protein L22 like 1). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rpl22l1

Retroname Coord Strand Genomic Region ENSG
Rpl22l1P2 chr4:55116752-55116910 + Intergenic
 ENSMUSG00000082704 UCSC
Rpl22l1P3 chr5:100740353-100740589 - Intergenic
 ENSMUSG00000104993 UCSC
Rpl22l1P5 chr6:127344868-127345205 - Intragenic
 ENSMUSG00000107243 UCSC
Rpl22l1P6 chr7:97055377-97055625 + Intragenic
Intragenic
 ENSMUSG00000083974 UCSC
Rpl22l1P1 chr1:148374256-148374679 + Intergenic
 ENSMUSG00000101208 UCSC
Rpl22l1P7 chr15:5331068-5331539 - Intergenic
 ENSMUSG00000114998 UCSC
Rpl22l1P8 chrX:67359471-67359947 - Intergenic
 ENSMUSG00000082202 UCSC
Rpl22l1P4 chr5:22733227-22733713 - Intragenic
Intragenic
 ENSMUSG00000084235 UCSC

Expression

Transcript Sequences

>NM_001347226.2
GTTCTCTTCCCACGGCTGCAGCTCAACATGGCGCCGAAAGACAAGAAGCCTAAGAAGTCCACCTGGAGGTTTCATTTGGACCTTACTCATCCAGTAGAAGATGGAATTTTTGACTCTGGAAATTTTGAACAGTTTCTACGGGAGAAGGTTAAAGTCAATGGAAAAACTGGAAATCTTGGCAATGTTGTTCACATTGAACGCCTGAAGAATAAAATCACAGTTGTTTCTGAGAAACAGTTCTCCAAAAGgtatttgaaatatcttaccaAGAAATACCTTAAGAAGAATAATCTCCGTGATTGGCTACGTGTGGTCGCATCTGACAAGGAGACTTACGAACTTCGTTATTTCCAGATTAGTCAAGATGAAGATGGTTCAGAGTCTGAGGACTAATTGGCCTCTGCTTGTAATACAATGAAAGTattctaaagaaatataaaattggactttatgagaaaataaaagtcatttcaCTCTATAAAAACA
>NM_026517.3
GTTCTCTTCCCACGGCTGCAGCTCAACATGGCGCCGCAGAAAGACAAGAAGCCTAAGAAGTCCACCTGGAGGTTTCATTTGGACCTTACTCATCCAGTAGAAGATGGAATTTTTGACTCTGGAAATTTTGAACAGTTTCTACGGGAGAAGGTTAAAGTCAATGGAAAAACTGGAAATCTTGGCAATGTTGTTCACATTGAACGCCTGAAGAATAAAATCACAGTTGTTTCTGAGAAACAGTTCTCCAAAAGgtatttgaaatatcttaccaAGAAATACCTTAAGAAGAATAATCTCCGTGATTGGCTACGTGTGGTCGCATCTGACAAGGAGACTTACGAACTTCGTTATTTCCAGATTAGTCAAGATGAAGATGGTTCAGAGTCTGAGGACTAATTGGCCTCTGCTTGTAATACAATGAAAGTattctaaagaaatataaaattggactttatgagaaaataaaagtcatttcaCTCTATAAAAACA