Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Snrpd2
Plot displaying the genomic locations of a parental gene (in chr1) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name small nuclear ribonucleoprotein D2 polypeptide
Also known as -
Coordinate chr1:80057140-80059990
Strand +
Gene summary Enables U1 snRNP binding activity. Predicted to be involved in spliceosomal snRNP assembly. Located in nucleus. Part of U1 snRNP. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human SNRPD2 (small nuclear ribonucleoprotein D2 polypeptide). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Snrpd2

Retroname Coord Strand Genomic Region ENSG
Snrpd2P1 chr6:22457274-22457791 + Intergenic
N/A UCSC
Snrpd2P2 chr8:117015545-117016041 + Intergenic
N/A UCSC
Snrpd2P3 chr14:35161132-35161623 - Intergenic
N/A UCSC
Snrpd2P4 chr20:28872901-28873426 - Intergenic
N/A UCSC
Snrpd2P5 chrX:72059367-72059763 - Intergenic
N/A UCSC

Expression

Transcript Sequences

>NM_001109399.2
CTTCTCTTGCTGTGCTCCAAAGGCTAAAGCAACGCGCTTGGAGGCGGGAGTGATCTGCTAGCGAAACCTTCACCATGAGTCTCCTCAATAAACCCAAGAGTGAGATGACCCCAGAGGAGCTGCAGAAGCGGGAGGAGGAGGAATTCAACACAGGTCCCCTCTCGGTGCTCACACAGTCGGTCAAAAACAACACGCAAGTGCTCATTAACTGTCGAAACAACAAGAAGCTCCTGGGCCGGGTGAAGGCCTTTGACAGGCACTGCAACATGGTGCTGGAAAATGTGAAGGAGATGTGGACTGAGGTCCCCAAGAGCGGCAAGGGCAAGAAGAAGTCCAAGCCTGTCAACAAGGACCGCTACATCTCCAAGATGTTCCTGCGCGGGGACTCAGTCATTGTGGTGCTGCGGAACCCGCTCATCGCTGGCAAGTAAACTAGAGGCCAGCCTCAGCCCGCTGAGAGCCTGCTCCCTGCCCAGCCAAGTCCCGCAGAGCCCTGCCCAATGAGCTAGAAATAAAACCCTGTGCTTTTTGTTTTTTA