Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Rps13
Plot displaying the genomic locations of a parental gene (in chr7) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name ribosomal protein S13
Also known as 2700063M04Rik
Coordinate chr7:115930742-115933425
Strand -
Gene summary Predicted to enable 5.8S rRNA binding activity; mRNA 5'-UTR binding activity; and small ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in negative regulation of RNA splicing. Predicted to be located in cytosolic ribosome and nucleus. Predicted to be part of cytosolic small ribosomal subunit. Predicted to be active in nucleolus and postsynaptic density. Orthologous to human RPS13 (ribosomal protein S13). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Rps13

Retroname Coord Strand Genomic Region ENSG
Rps13P1 chr1:5688019-5688252 - Intergenic
ENSMUSG00000103936 UCSC
Rps13P2 chr1:63077391-63077788 + Intergenic
ENSMUSG00000081617 UCSC
Rps13P11 chr11:61096505-61097027 - Intergenic
ENSMUSG00000082626 UCSC
Rps13P14 chr13:64509163-64509518 - Intergenic
ENSMUSG00000114072 UCSC
Rps13P15 chr13:78434711-78435230 - Intergenic
ENSMUSG00000114383 UCSC
Rps13P13 chr13:113074091-113074601 + Intragenic
ENSMUSG00000114477 UCSC
Rps13P17 chr16:93816850-93817226 + Intergenic
ENSMUSG00000116939 UCSC
Rps13P4 chr2:72375798-72375991 + Intergenic
ENSMUSG00000081538 UCSC
Rps13P3 chr2:143697523-143697941 + Intragenic
ENSMUSG00000082987 UCSC
Rps13P5 chr3:42317020-42317212 - Intergenic
ENSMUSG00000104089 UCSC
Rps13P6 chr3:58312173-58312435 + Intergenic
ENSMUSG00000105154 UCSC
Rps13P8 chr7:88179610-88180132 - Intergenic
ENSMUSG00000069972 UCSC
Rps13P7 chr7:133340167-133340689 - Intragenic
ENSMUSG00000081431 UCSC
Rps13P10 chr8:87774321-87774843 + Intergenic
ENSMUSG00000066362 UCSC
Rps13P9 chr8:120328868-120329384 - Intragenic
Intragenic
ENSMUSG00000081378 UCSC
Rps13P12 chr12:87441264-87441428 + Intergenic
N/A UCSC
Rps13P16 chr15:96546678-96547085 - Intergenic
N/A UCSC
Rps13P18 chr17:30822168-30822684 + Intragenic
N/A UCSC
Rps13P19 chrX:13440321-13440601 + Intragenic
Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_026533.3
TGAGTGGCGTCACTTCCTGTGCGGCTTGATTTCCTGTGCCGTTTCCTACCTCGTTCTCTCTTTGCTGCCAGACCTCCGCCATCATGGGTCGCATGCACGCTCCCGGGAAGGGCCTGTCCCAGTCGGCGCTGCCCTACCGCCGTAGCGTCCCCACGTGGCTGAAGTTGACGTCTGACGACGTGAAGGAACAGATTTACAAATTGGCCAAGAAAGGCCTGACTCCCTCCCAGATAGGTGTAATCCTGAGGGACTCACACGGGGTGGCCCAGGTCCGTTTTGTGACTGGAAATAAAATCTTGAGAATCCTCAAGTCCAAAGGCCTTGCCCCTGACCTCCCCGAGGATCTCTACCATTTGATTAAGAAAGCTGTTGCTGTCCGAAAGCACCTTGAGAGGAACAGAAAGGATAAGGATGCTAAATTCCGCCTGATTCTGATAGAGAGCAGAATTCACCGATTGGCTCGATACTATAAGACTAAGCGGGTGCTCCCACCTAATTGGAAATAtgaGTCATCCACAGCCTCTGCTCTAGTGGCATAAATGCTGTTGTGTGCACAAGCAATAAAATCACTTTGAGTAACTT