Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

Summary

Gene Name Gcsh
Plot displaying the genomic locations of a parental gene (in chr8) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name glycine cleavage system protein H (aminomethyl carrier)
Also known as 1100001L02Rik|5730591C18Rik
Coordinate chr8:117708706-117720237
Strand -
Gene summary Predicted to enable aminomethyltransferase activity and enzyme binding activity. Predicted to be involved in glycine decarboxylation via glycine cleavage system and protein lipoylation. Located in mitochondrion. Is expressed in several structures, including alimentary system; integumental system; metanephros; nervous system; and respiratory system. Human ortholog(s) of this gene implicated in glycine encephalopathy. Orthologous to human GCSH (glycine cleavage system protein H). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gcsh

Retroname Coord Strand Genomic Region ENSG
GcshP5 chr14:60832933-60834249 - Intragenic
ENSMUSG00000114408 UCSC
GcshP7 chr18:63847017-63847165 - Intragenic
ENSMUSG00000117795 UCSC
GcshP8 chr19:61245313-61246455 - Intergenic
ENSMUSG00000117782 UCSC
GcshP1 chr3:27332206-27333268 + Intergenic
ENSMUSG00000102186 UCSC
GcshP2 chr3:37609262-37610683 - Intragenic
ENSMUSG00000080723 UCSC
GcshP3 chr7:97303486-97303865 - Intragenic
ENSMUSG00000108547 UCSC
GcshP4 chr9:108037445-108038666 + Intragenic
ENSMUSG00000103658 UCSC
GcshP9 chrX:139521752-139522817 - Intergenic
ENSMUSG00000081408 UCSC
GcshP6 chr14:73263253-73264320 + Intergenic
N/A UCSC
GcshP10 chrX:54889067-54889683 - Intragenic
N/A UCSC

Expression

Transcript Sequences

>NM_026572.4
ACTCTGGACCCACCCCGTCCCCACCGGCCCGGTGGCGGAGGCGAAGCGCAGTTACCCTCCGGACCTCTGACCATGTCGCTGCAAGTGTCGAGGAGCTTGCGGGTTGTGGCCTACAGCCTGCGCACCGCCCTGACCTTCTGCTCGCCGCGGCCCTGTGTACCGAGCGCCGCCGCCGTCCGCTCACTGCGCACCGGATCTGCTTTGCTGTCGGTGCGTAAATTCACAGAGAAACATGAGTGGATAACGACAGAGGAAGGTATTGGAACGGTGGGAATCAGCAATTTTGCACAGGAAGCGTTGGGAGATGTTGTTTACTGTAGTCTGCCTGAAGTTGGgacaaaattgaaaaaacaagAGGAGTTTGGTGCTTTGGAGAGTGTGAAGGCTGCCAGTGAACTCTACTCTCCTCTGTCAGGAGAGGTAACCGAAGTCAATGAAGCTCTTGCCGAAAACCCAGGGCTTGTCAACAAATCCTGTTACGAAGATGGTTGGCTGATCAAGATGACACTGAGTGACCCTTCAGAGATGGATGAATTGATGAGTGAAGAAGCATATGAGAAATATGTGAAGTCCATTGAGGAGTGACCATGGCACCCCTCTACTCCCAGATCAAACTGGATGTGACGTGCTCCAGCATGCTTGTCTTAAACTAGTGGAGAATAGAGGACTTGAAATAACTTAGCAATACTGATGGAAAGAAACTGTTCTTGACAGTGCTACTTAAGAGCCACCCCCAACTTCCTAAAGGATGCAGATAAACACAGTGTACAGGTTTTTGATAATTGCCATACTAAGTATTTAGACTAGGGGTTAAGCCCTGGTGTTTAGAATTCTGAGGATCGTCTGCTGTGAAACGTGGTTATGAGGCTGGTTTTGGTGACGGACcaccttctaatcccagcacgcaACAGGCAGATGTTAGTTAGTTCAAGGTCGGTCTACACaacaagttctagaccagccacaGCTACATGGCGAGACCCTACCTACTGGGTATAAGACTTTCATAATTCAAGATAATAGTGGTGTATCTTAGATAATTTTGTTACTTGCCCATATCCACCACTGGATTTGGGTCAGAGATTAGTGTCTTCTCATTGGGAATGCAAGGAAGTGTTGTACAGTGTCAGAGGCAGGAGAGTACTGTCTTTGTTTCACCATGTGCTGTGTTGACTGTTGTTTTCCCACCGTGAAGCACCGGCTTTGCAACACTgcgaaacaaataaaacattcatCCTCTTTGTTGA