Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Gar1
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name GAR1 ribonucleoprotein
Also known as C430047J18Rik|Nola1
Coordinate chr3:129618561-129625045
Strand -
Gene summary Predicted to enable box H/ACA snoRNA binding activity and telomerase RNA binding activity. Predicted to be involved in snoRNA guided rRNA pseudouridine synthesis and telomere maintenance via telomerase. Predicted to act upstream of or within rRNA processing. Predicted to be located in dense fibrillar component; fibrillar center; and nucleoplasm. Predicted to be part of box H/ACA snoRNP complex and box H/ACA telomerase RNP complex. Predicted to colocalize with chromosome, telomeric region. Orthologous to human GAR1 (GAR1 ribonucleoprotein). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Gar1

Retroname Coord Strand Genomic Region ENSG
Gar1P1 chr2:18254055-18254656 - Intragenic
 ENSMUSG00000083070 UCSC

Expression

Transcript Sequences

>NM_026578.3
ACTTCCGCCACCTCTAGCGCGGTGGCCCTTGCGTGGatgaggtgggggcgggggggggtcaCGCTGGACGCTATTGTTTCTCTTCCGGTGCTGTGTGCTCTACTCGGTAAGGCGTTGGGACCGCTGCGTCCGGTAGTGACGGGCCCTTCCTGCAAACCAGCCCTTCCAATTTCTAGTCTGGTAACATTGGACGGCTACGGTGGCCGAGGAGGTTTGAGCGCGCCGGAAGTGTCCCTCCGCGCGCGCGCGCCGGGCTAGGCTGGAGACGCACGTGGCGCGGCCGGAGAGAGCATGTCTTTCCGAGGCGGAGGTCGCGGAGGCTTTAATCGCGGTGGTGGAGGCGGAGGCTTCAACCGTGGCGGCGGCAGCAACAACCACTTCCGAGGGGGcggcggaggcggcggcggcagtTTCAGgggcggaggcggcggcggcggcggcagttTCAGGGGCGGCGGCCGAGGAGGATTTGGACGAGGGGGCGGTCGTGGAGGCTTTAATAAATTtcaagatcaagggcctccagAACGTGTCGTCTTGTTAGGAGAATTCATGCATCCCTGTGAAGATGACAtcgtgtgtaaatgtaccaccgaGGAGAACAAGGTGCCCTACTTCAACGCCCCTGTTTACTTAGAAAACAAAGAGCAAGTCGGGAAAGTGGATGAGATATTTGGACAGCTTAGAGATTTTTATTTTTCAGTTAAGTTGTCAGAAAACATGAAGGCATCTTCCTTTAAAAAGCTACAGAAGTTCTATATAGACCCATACAAGCTGCTGCCGCTGCAGAGGTTTCTGCCTCGTCCTCCTGGTGAGAAAGGACCTCCCAGAGGTGGCGGCGGTGGCGGCAGGGGAGgtcgaggaggaggaagaggaggcggtGGCCGAGGTGGTGGAAGAGGTGgtggttttagaggaggcagaggaggaggtgggggcttcagaggaggaagaggaggtggcgGATTCCGAGgaAGGGGACATTAGCTGTCCAGTTGGCAGACCTGACCACTTGTGTTCCCGCTGCGTGGCCTGCTTCTGCTATGGTTGACGTCTGTGTCTGGAGCAGTCTTGAGGAGGCCATTCCGTCAGTGGAGCTGAGTCAGCAGCATCGCGTAGAAACAAGGGGAGCAGGGCAGTTAGCTCTGCTCAGAGAGGAGAACCCCGCTTTGTACAGAACCTGGCACTCTGTGGGTGCTTAGAGAAGACAGGACTTTTCATTTGAAGCatatttggattttttaaataaaattttttatttccttaactTA