Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Phf5a
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name PHD finger protein 5A
Also known as 1110007B08Rik
Coordinate chr15:81748717-81756093
Strand -
Gene summary Predicted to enable RNA binding activity and zinc ion binding activity. Acts upstream of or within stem cell differentiation. Located in nuclear matrix and nuclear speck. Is expressed in several structures, including brain ventricular layer; branchial arch; limb; maxillary process; and sensory organ. Orthologous to human PHF5A (PHD finger protein 5A). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Phf5a

Retroname Coord Strand Genomic Region ENSG
Phf5aP3 chr13:120378723-120379573 - Intergenic
 ENSMUSG00000101579 UCSC
Phf5aP1 chr7:102784947-102785386 + Intergenic
 ENSMUSG00000082714 UCSC
Phf5aP2 chr7:27409130-27410299 + Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_026737.3
TTCCGGCCGCCGGCTTGGAAAAAGAGTTATGGCTAAACATCATCCAGATTTGATTTTCTGCCGCAAGCAGGCTggtgtggCTATCGGAAGACTGTGTGAAAAATGTGACGGCAAGTGTGTGATCTGTGATTCCTACGTGCGTCCCTGCACCCTGGTCCGCATATGTGATGAGTGTAACTATGGATCTTACCAGGGCCGGTGTGTAATCTGTGGCGGCCCCGGAGTCTCCGATGCCTACTACTGTAAAGAGTGCACCATTCAGGAGAAGGATAGAGATGGTTGTCCAAAGATTGTCAATTTGGGGAGCTCTAAGACAGACCTGTTCTATGAACGCAAAAAATACGGCTTCAAGAAGAGgtgatgggtgggtggctcctTCCTCCCCCATCAAACTGCTGCAGCTGCCAGAATAGACGCCTACTACCACCGCCTAAAGGGAACGGAGCTGAGTGTCACCAGAGCAGCCTGCTAGTGCTAGTGTCCTGGCCCCTGCCACTAGCAAGTGCCCATGGAGCATCTGGCAGACTGGAGGAGACGTTGCTCGCTTAGTCCCTAGTTCCCTTTTTGTTTTGAGTTGGAAAAGCAAGGCTCTGTTCTCCACATTGATCCTTTCAACTCAAAAGCCTCAAAACAAGTTGGTGTGTGTCCTTGGTGATGAAACTGTCCCGGCAGAAGTGTGGTCTTGCAGCAGCTATGATGGGGTTGTCCTGTGACCCTCAGTGTGGCCAGGTGTGACCTGAACAGTAATGTGACCTGACAATTTGCAGGTGGTGCTGGGCTCGTGTTATTTTCCTTGTAAGTTGGAAGTTTCAATTACGCTAATAAAGTTGGCTACCTTCCCCGTTAACTTTGAACGTCTACTTTTAGTCATCTAGGTTTTGGTGACTAGAACCAACCTAGAGGCTGTGGGGCTAATGATGGACGGGCAGACTGGAGGAGACGTTGCTCGCTTTGCCCTCTCATGGAAAGAACTCAGAGGACCCTGAGGGTGAATGAGGCCATTTTAgttttagggtgtttttttttttccatatccaaatttttatttttgtctcactcaatagctcaggctggcctgaaaactattggtgatcctcctgccttagcctttagAGTCTTGACATTTCATATGTAAATGACCAGACCTGAGTTTTCTAATACCGATTTCAAAGAGATGTCCTACAGTAATGGTgaggaaaataagataaaattaggTTGATTAATTAGAGGAACTTTGGTTTGTTTCCTGCAgtgtatataatttatttgaagggtatgtttccttttttaaaaaatgtaagattttgtgtatgaatgttttgtttgcatgtatgtatgtgtgcatgcttggtaCCTAGAGTTAAGGGCAGCAGACACCCCTGGAGTTCTGGGTGGATATGaactaccatgtgagtgctgggaatcaaacctagggcctTTTCAAGAGCAAcggtcatctcaccagccccaacaaaTATCTTGTAAATTACCCAAATTAGAAAATTCAGCCATATCCATCTATGTGGGTCAGTTCATTGCTGCCTACTGATGGGAGAGTTGTCAGGGAGGGCGTTGGCCTTGTTTGTACTCCAACCTAGTAACAAAGTCATGGCAAGAAATAAACTTTTAAGGGTTTTGGTTTGAGTCC