Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Nsmce2
Plot displaying the genomic locations of a parental gene (in chr15) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase
Also known as 1110014D18Rik
Coordinate chr15:59246047-59473538
Strand +
Gene summary Predicted to enable SUMO ligase activity. Predicted to be involved in several processes, including DNA recombination; positive regulation of cell cycle process; and protein sumoylation. Predicted to act upstream of or within DNA recombination; DNA repair; and cell division. Predicted to be located in PML body and chromosome, telomeric region. Predicted to be part of Smc5-Smc6 complex. Predicted to be active in nucleus. Is expressed in brain; spermatocyte; and testis. Used to study Bloom syndrome. Human ortholog(s) of this gene implicated in Seckel syndrome 10. Orthologous to human NSMCE2 (NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Nsmce2

Retroname Coord Strand Genomic Region ENSG
Nsmce2P3 chr14:64914720-64915067 + Intragenic
 N/A UCSC
Nsmce2P2 chr14:37443979-37445124 + Intergenic
 ENSMUSG00000114766 UCSC
Nsmce2P1 chr11:78781230-78781617 - Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001164604.1
GGCCCGGGCCCGGGCATCATGTGATCGCTCGCGGGCGCCAAGTGATGACGCAGAGCGCGCGCGGGTCGTTTCAGCCACAGAAGTGGGCTGAGGAAAGGAGTCGGGGTCTGGGCGTGCGACGTTCGGCTAGATATCACCGAGCTAGGTGGGACAGCCAGGTAACAATTTCAAGATGCCAGGACGGTCCAGTACAAGTTCAGGTTCTACCCGTTACATATCCTTCAGTGGCatagagtcagctctctcctcctTAAAAAACTTCCAATCCTGTATCAGCTCTGGAATGGACACAGTTTCTAGTGTTGCCTTGGACCTTGTGGAGACTCAAActgAAGTGAGTAGTGAGTACAGTATGGACAAGGCCATGGTTGAGTTTGCTAAAATGGATCGAGAACTAAGCCATTATGTTAAGGCTGTGCAGTCTACAATCAATCATGTAAAAGAAGAACGTCCAGAAAAAGTACCAGATTTAAAATTACTGGTAGAGAAGAAATTTTTGGCTTTACAGGATAAGAACTCTGATGCCGACTTTAAAGAGAATGAAAAGTTCGTGCAGTTCAAGCAACAGCTGAGGGAGCTGAAGAAGCAATGAACTCCCAGGCTGTTTCCCACAGCGAGGGCGCCATTTTACATTTCCACCAGCAGTGTCTGAGGGTTCCAATTGCTTCCCGTCCTTGCCAGCACTTGTCACTGCCTGTCTTCTTACTGTAGCCATTGTAGTGGGTGTGAAGTGGTGTCTCGTTGTTTTaccttgcatttctctgatggattAATATTGTGGTGTTTATATTACTAACCTAGGCAGAAGTTTAAATCTCATACTTTCATATAGAAACCACTGCATATTACTTGGATTAACCAGTAATTCTGAAGCAAAACCATAGTTCTGTACCAGATAAATGTCGTTCATGAAAttatacttgaaaaaaaaactacaaagtaAAATGACTTGGGATGAAGATAACACACTCACCTGGGACATTAGTTTTGCAGTATGAATTCATCTGCAGTGTTCTTTATCTGCACTACTAAAATGCTGTTGTGTGACATTTACTGGATAATCCAGACAGCACTTGACTAAATCCACAGTATGGTGTCACTGGGTAAACACTTGAAAATGGAAATGTGTATCCCTTCTGGTTTTATcagttgagattaaaggtggttTATAGCACAGGAAACCTTTTCTCCACCACCCTGTATCTCAGTGTGGGCCAATAATCTGTCACCTGAAACCACTTAAAATAGGTTGGGCTTTCTTGactgtcctgttgctgtgatgacaTCAGGATCTGACTGCAGAGGGGAGAAAAGAACACTTCTCTGACTTGTTTGCCTCCATGTCCTTTGTCCCCAGTTAAAAGCACTGCCCTTCTTTAGCCCTTACTTCTGTCTGGTTCTCAGATGTTTTCTACACCGTCTGTCTCTGTGGAGCTCCTAGTCTGCTCACAGTTGTTTCTGTCAAGGAAAGCTCCGTGTGAGCTTGGAAGTGTGAGATTCACCAGCCCTAGATATGTACAAAGTGAGGAGGGGCTGGTGGAGGAAAAAAGTATCTCAAACCAAACTCCAAAGATGCTTTCCCTAGAAAGAGTCTCAGGACAGCTTTGAAAGCTCCCCAGGACAAATAACTTCACAGGAGACCAGTGGTCCTCACTGGCACAGAGAGAGCCTCACCAGTGCTAAGCTTCCTGTGTGCTGTGCATTCCTGACTGCATTCGGCACTGTTTGCTGAGGGCCTGCAGGGGaccaaggagaaaagagaaaggaagagtggCTATGGCTAGTTCCGCCCTTCTTAGTTTCTACCTCTGCCTTATCTGCTCCTCATCTTACTGTGGGCCTGTGGCTCGGCTGGGGAGTGGTTCCAAAGAATAACTAGGTTGATTGGCAGGAATTGAATTCTGCCACCCCAGAGTAACGGGAGGCAACAACCTCAGACCCTTAAGCTGGTTTAAGCCTTCGTGAGTTCTCTTTTGACACTTTTTGAAACACTGCTCTGGGTGAAGCAAGCACATTGTGGCTACTAAAGATCCTGGACGACTGGCTAACCCTGGCCCATGTGCCTTCAGGACTGTTACAGAGGAACTAGATAGGAATCATTGGTAGGTTAGTAGCAATTGTGGTTTGGTTCTGATTTTTAAAGTGACTAGCCCTCaagtaacagaaaaataaaggatGGCAAGTGCTTGTTGACTGGACCGTTTGCTAAGATCGTGCGAATAGCTGTGCATAGGCTCCGGGCTCATTTTTTCCATAGCCCTCTGACATGACAAGGTCAACCTTCAAGTGAGCTGTAATGAAACTTCGTGCATCCCAGCCGTATCCAGTGTGCCCTTAGCTTAACACTcatctgtctgtgacctgacataGTGAATGTAGTGGCTCCCTGCTCCCACAAGTCCTATGAGgaatggtggggaggaggtataggagTGGAGAGGGCTGTACAGCAAGAACTTGCCCACGTTAGGAAGCCAGCTGACAGGTTTGGCTGTGGCCGAGCTTATTTTCCATTGGATTCTGAGTTTCCTTGCAGCAGTTTTTACAGAAAGCTTTAAGCTCCTTGCCTTCATAGTCCCACACAGGAGGGGATGATGGCCGAGGAAAAGCGGATTCATTTGTTCCTGTAACAAAAGAATCAAATGTACTTCTGTGGAACAAAAATGCATTGGAAATTTTGCTTGTTGTTTTCTAttacaaaattgaaataaaaaaggaatgttACCTGTA
>NM_001374768.1
GATGACGCAGAGCGCGCGCGGGTCGTTTCAGCCACAGAAGTGGGCTGAGGAAAGGAGTCGGGGTCTGGGCGTGCGACGTTCGGCTAGATATCACCGAGCTAGGTGGGACAGCCAGGTAACAATTTCAAGATGCCAGGACGGTCCAGTACAAGTTCAGGTTCTACCCGTTACATATCCTTCAGTGGCatagagtcagctctctcctcctTAAAAAACTTCCAATCCTGTATCAGCTCTGGAATGGACACAGTTTCTAGTGTTGCCTTGGACCTTGTGGAGACTCAAActgAAGTGAGTAGTGAGTACAGTATGGACAAGGCCATGGTTGAGTTTGCTAAAATGGATCGAGAACTAAGCCATTATGTTAAGGCTGTGCAGTCTACAATCAATCATGTAAAAGAAGAACGTCCAGAAAAAGTACCAGATTTAAAATTACTGGTAGAGAAGAAATTTTTGGCTTTACAGGATAAGAACTCTGATGCCGACTTTAAAGAGAATGAAAAGTTCGTGCAGTTCAAGCAACAGCTGAGGGAGCTGAAGAAGCAATTAGTGAAACCCAAAGAAGATGGAAGACACAGTGAATTCGACCCGAATAAGGATTCCAGTAGAGCAGGCAATAAACGagATGGTATTCATGCAGACAGAGAGAATGATCTGACAGAAGGAGTTGACGAAGATATGATTGTGACCCAGAGCCAAACCAATTTCATCTGCCCCATAACACAGCTGGAAATGAAGAAGccagtgaaaaataaaatgtgtggcCATACATACGAAGAGGAAGCCATTGTTCGCATGATTGAATCCAAGcataagaggaagaagaaggcctGTTGCCCCAAAATTGGCTGTAGCCACACAGACATGAGAATGTCAGATCTCATTCCGGATGAAGCCCTGAGAAGGGCAATCGAGAGccacaacaagaagaaaaaacgCCACTCCGAATAGGAGCAAGCCACCTGCCCACAGGGATGTCAGCAGCCTACCTCCCCGCCAGCCACCAGAGAGTGAGGGATGCCAGCGATAGGCCTGGCCAAGCAGCGCTGTTTGCGGTAACCCTTGAAGGCTAATTGTAATTGAAAGCATTTTTTAAGTTACACAGTAAAAACACAAGTAcattatattctttattttcaagtgctctgaaattttaaataaaactttgatAATCCTCAGCTCA