Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name Lamtor5
Plot displaying the genomic locations of a parental gene (in chr3) and its retrocopy(ies). Each line represents a retrocopy.
Specie Mus musculus
Full Name late endosomal/lysosomal adaptor, MAPK and MTOR activator 5
Also known as 1110003H18Rik|Hbxip|XIP
Coordinate chr3:107186174-107191398
Strand +
Gene summary Predicted to contribute to guanyl-nucleotide exchange factor activity and molecular adaptor activity. Predicted to be involved in several processes, including negative regulation of cysteine-type endopeptidase activity involved in apoptotic process; positive regulation of interleukin-8 production; and positive regulation of intracellular signal transduction. Predicted to act upstream of or within positive regulation of NF-kappaB transcription factor activity. Predicted to be located in cytosol. Predicted to be part of Ragulator complex. Predicted to be active in lysosome. Orthologous to human LAMTOR5 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 5). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from Lamtor5

Retroname Coord Strand Genomic Region ENSG
Lamtor5P1 chr2:33213221-33213835 + Intragenic
 ENSMUSG00000082844 UCSC
Lamtor5P3 chrX:158367395-158368108 - Intragenic
 ENSMUSG00000082693 UCSC
Lamtor5P2 chr13:110256019-110256718 + Intragenic
 N/A UCSC

Expression

Transcript Sequences

>NM_026774.2
TTTGAAGGCCCAGCACCCCCAATCGAAAGCCAGCCATCACTGGTCCTGTGGTAGTAGCTATGCCTTTTCGTAAAGAGCGCGGACGCGGCGCCGCGCTGAATTTCGTCCCTCTGGAGACGCCGTCCAGGCGCCCGCCTCGGTCAAGTCACGTGATCGAGGTTTGCGGTGAAGGAGGAAGTGTTTTGCTGCGGGGTCCTGGCCTGGGGCGGACAGCCTGCGGGATGGAGGCGACTTTGGAGCAGCATTTGGAGGACACAATGAAGAATCCATCCATTGTTGGAGTCCTATGCACAGATTCACAAGGACTTAATCTGGGCTGCCGTGGTACCCTGTCGGATGAGCACGCTGGAGTCATATCTGTTCTAGCCCAGCAGGCAGCTAGGCTAACCTCTGACCCCACCGACATCCCTGTGGTATGTTTAGAATCAGATAATGGGAACATTATGATCCAGAAACACGATGGCATCACAGTGGCTGTGCACAAAATGGCCTCTTGACATCTGATGTCAGCTCTCCAGTGGCCTCTCACCGGGATTCAGTCATGCCTGTCTCAGCTCATTTGTAAAACTATTAAAGTTCCAGAAATAGGCCATTCAGTTAATGTCCAATGTGGACTCCCTTATTTATATGACAGCCAGTTACCAAGACATCAGTTAGAGAGGAGCAATTGTTTGGGCTTTTGTCACTCTGCTCTTTGGTGACAGTCACTGTAGTCCAGGATCACAGCCCATCATGGCCTagaactatgtagcccaggctgacttcaaatgtATGGTCTTCCTGCTTTAAACACATACATCCTGGAATTAAAGCATTTGTCACTAAGGTTTAGGTCACTTTGTATATAGAACTTCATTATGGCCAATAAACCTGTTCTGAGGAAA