Imagem 1

Example: RPL12P6, GAPDH, ENSG00000237984

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Summary

Gene Name H2az2
Plot displaying the genomic locations of a parental gene (in chr14) and its retrocopy(ies). Each line represents a retrocopy.
Specie Rattus norvegicus
Full Name H2A.Z variant histone 2
Also known as H2A.Z-2|H2afv
Coordinate chr14:86687782-86706639
Strand -
Gene summary Predicted to enable DNA binding activity. Predicted to be involved in heterochromatin assembly. Predicted to be located in nucleus. Predicted to be part of nucleosome. Orthologous to human H2AZ2 (H2A.Z variant histone 2). [provided by Alliance of Genome Resources, Apr 2022]

Retrocopy(s) from H2az2

Retroname Coord Strand Genomic Region ENSG
H2afvP1 chr3:110362050-110362582 + Intergenic
 N/A UCSC
H2afvP2 chr4:150029922-150030586 - Intergenic
 N/A UCSC
H2afvP3 chr5:167561452-167561696 + Intragenic
 N/A UCSC
H2afvP4 chr6:88013796-88014493 + Intergenic
 N/A UCSC
H2afvP5 chr18:84443548-84444244 - Intergenic
 N/A UCSC

Expression

Transcript Sequences

>NM_001106019.1
GGCATTGTCCGGCTCTAgctgcggcggtccgactgcgagagcagcggcggcggcgcggggctgcagtgggcgtcgcgcggcCGAGACCATGGCTGGAGGCAAAGCTGGAAAAGACAGCGGGAAGGCCAAGGCTAAGGCAGTGTCTCGCTCACAGAGAGCTGGGCTCCAGTTTCCTGTGGGCCGCATCCACAGACACTTGAAGACTCGCACCACAAGCCATGGACGGGTGGGCGCCACTGCTGCTGTGTACAGTGCTGCAATTCTGGAGTACCTCACAGCTGAGGTGTTGGAGTTGGCAGGTAATGCTTCTAAAGATCTCAAAGTAAAGCGCATCACCCCACGTCACTTACAGCTTGCAATCCGAGGTGACGAAGAGTTGGATTCACTGATCAAGGCTACCATAGCCGGGGGCGGTGTGATTCCGCACATCCACAAGTCTCTGATCGGAAAGAAGGGGCAGCAGAAAACTGCTTAGGACGTGAGTCACTGACCTGCTGTCCTCACTGTGTGTGACTGGGCAGAGGGTACCAGTCGGTGTGTGGGAAAGCATAGACAATTGCTGTAGACAGAAGACACATTTGTATGTTTTTAGACTCTCGAAGTTTGATAAACTCCTTTCCCTGTGGTCAGTCATGTGTTGACTGGCCAGGTCTCTCCCTTGTGTTTTATACAAAAATAGAATTGATAAACATTTTTTACAAAAGGAATTTGTCTCAGTATTTCTTCATGATGTGTTAGAAATACTTTTTTTTTTTTTTGACACTCCGTCAGTAAATTAAACGCTTAAAGTACGCAGATCCACCCCCAGATTGCGATTTAAgactgtttcctgcatggtttgtctcctcagtcacggtccacaggactctgagaagtcgtaggaatatgcaggcgcagactcgaagccccgcttcatctccaatgttgtggaaagggactgtacatcatcgggcagtaccctatgctcccGTGTGTTAGAAATACTTTGTTTTACctgggcatggccgtgttgcttgcgaccccagcatttgggaggagtgggcaggaccttcagagttggtgctgatctttgcctacactccaagttctttgacaacctagactacaagagactctgtctcaaaagaaaaaaCATTGTTTGTTCAGACATTGACATTTTAAGTTGCAAATTAGTTATTCAGAATTATCTTGAGGCAAAAATTAGGATGTAATGTACCTTGATTGGTATAGTTTTTGTTTGAATCTCGGATATAATCAAtttttagaaatatgtatttattaatgtatacagtgttctgcctccatgtatgcctgcaggccataagaaggaacaaggtctcttaacagatggttgtgagccaccatgtggttgctgggaattgaactcaggacctctggaagagcagtcagtgctcttaactgctgagccatctctccggtccTCATCAAGGAGTGTTACTACCCCTCTTTATGGGCATGTGCGCCCATTGTCCACAGGAATTAATGATCTGCTGAGAAGACAGTCGAGCTGGCAGAAACGACAgtggagtcaggacacaaacctgggtctttctggcttcaGAGTGCCCCCTGACCTAGAAATGATACTACTGAGTTAGACTTTTCTGATTGGGTCCTGGAATTCTAACTTTGTGGTCACTCACTGATCCCACTAACCTGCAGTAACTGTATAAAGATGATGTCTACGTGACTGCAAGATGTAAGTTAATTCACTAGTAAATGTGACAGCCAAAATTTTATTTTTCATCAATGTCTTTGTGAGAAATTGATATTTTATAACATAACAGTATCAAAACAGTTCATTTTTGAAGAAATATTTTATTATGGGAATTCTGACAAGTGCACAGAAATAAAGAGAATAGCACTAGCGTGACA